Antibodies

ABSTRACT

The present invention is related to methods and compositions for the therapeutic and diagnostic use in the treatment of diseases and disorders which are caused by or associated with amyloid or amyloid-like proteins including amyloidosis, a group of disorders and abnormalities associated with amyloid protein such as Alzheimer&#39;s disease. The present invention provides novel methods and compositions comprising highly specific and highly effective antibodies having the ability to specifically recognize and bind to specific epitopes from a range of j3-amyloid proteins. The antibodies enabled by the teaching of the present invention are particularly useful for the treatment of diseases and disorders which are caused by or associated with amyloid or amyloid-like proteins including amyloidosis, a group of diseases and disorders associated with amyloid plaque formation including secondary amyloidosis and age-related amyloidosis including, but not limited to, neurological disorders such as Alzheimer&#39;s Disease (AD).

The present invention is related to methods and compositions fordiagnosis and treatment of amyloidosis, a group of disorders andabnormalities associated with amyloid protein such as Alzheimer'sdisease.

Amyloidosis is not a single disease entity but rather a diverse group ofprogressive disease processes characterized by extracellular tissuedeposits of a waxy, starch-like protein called amyloid, whichaccumulates in one or more organs or body systems. As the amyloiddeposits accumulate, they begin to interfere with the normal function ofthe organ or body system. There are at least 15 different types ofamyloidosis. The major forms are primary amyloidosis without knownantecedent, secondary amyloidosis following some other condition, andhereditary amyloidosis.

Secondary amyloidosis occurs during chronic infection or inflammatorydisease, such as tuberculosis, a bacterial infection called familialMediterranean fever, bone infections (osteomyelitis), rheumatoidarthritis, inflammation of the small intestine (granulomatous ileitis),Hodgkin's disease, and leprosy.

Amyloid deposits include amyloid P (pentagonal) component (AP), aglycoprotein related to normal serum amyloid P (SAP), and sulphatedglycosaminoglycans (GAG), complex carbohydrates of connective tissue.Amyloid protein fibrils, which account for about 90% of the amyloidmaterial, comprise one of several different types of proteins. Theseproteins are capable of folding into so-called “beta-pleated” sheetfibrils, a unique protein configuration which exhibits binding sites forCongo red resulting in the unique staining properties of the amyloidprotein.

Many diseases of aging are based on or associated with amyloid-likeproteins and are characterized, in part, by the buildup of extracellulardeposits of amyloid or amyloid-like material that contribute to thepathogenesis, as well as the progression of the disease. These diseasesinclude, but are not limited to, neurological disorders such asAlzheimer's Disease (AD), including diseases or conditions characterizedby a loss of cognitive memory capacity such as, for example, mildcognitive impairment (MCI), including diseases or conditionscharacterized by a loss of cognitive memory capacity such as, forexample, mild cognitive impairment (MCI), Lewy body dementia, Down'ssyndrome, hereditary cerebral hemorrhage with amyloidosis (Dutch type);the Guam Parkinson-Dementia complex. Other diseases which are based onor associated with amyloid-like proteins are progressive supranuclearpalsy, multiple sclerosis; Creutzfeld Jacob disease, Parkinson'sdisease, HIV-related dementia, ALS (amyotropic lateral sclerosis),inclusion-body myositis (IBM), Adult Onset Diabetes; senile cardiacamyloidosis; endocrine tumors, and others, including maculardegeneration.

Although pathogenesis of these diseases may be diverse, theircharacteristic deposits often contain many shared molecularconstituents. To a significant degree, this may be attributable to thelocal activation of pro-inflammatory pathways thereby leading to theconcurrent deposition of activated complement components, acute phasereactants, immune modulators, and other inflammatory mediators (McGeeret al., 1994).

Alzheimer's Disease (AD) is a neurological disorder primarily thought tobe caused by amyloid plaques, an accumulation of abnormal deposit ofproteins in the brain. The most frequent type of amyloid found in thebrain of affected individuals is composed primarily of Aβ fibrils.Scientific evidence demonstrates that an increase in the production andaccumulation of beta-amyloid protein in plaques leads to nerve celldeath, which contributes to the development and progression of AD. Lossof nerve cells in strategic brain areas, in turn, causes reduction inthe neurotransmitters and impairment of memory. The proteins principallyresponsible for the plaque build up include amyloid precursor protein(APP) and two presenilins (presenilin I and presenilin II). Sequentialcleavage of the amyloid precursor protein (APP), which is constitutivelyexpressed and catabolized in most cells, by the enzymes β and γsecretase leads to the release of a 39 to 43 amino acid Aβ peptide. Thedegradation of APPs likely increases their propensity to aggregate inplaques. It is especially the Aβ(1-42) fragment that has a highpropensity of building aggregates due to two very hydrophobic amino acidresidues at its C-terminus. The Aβ(1-42) fragment is therefore believedto be mainly involved and responsible for the initiation of neuriticplaque formation in AD and to have, therefore, a high pathologicalpotential. There is therefore a need for agents to prevent the formationof amyloid plaques and to diffuse existing plaques in AD.

The symptoms of AD manifest slowly and the first symptom may only bemild forgetfulness. In this stage, individuals may forget recent events,activities, the names of familiar people or things and may not be ableto solve simple math problems. As the disease progresses, symptoms aremore easily noticed and become serious enough to cause people with AD ortheir family members to seek medical help. Mid-stage symptoms of ADinclude forgetting how to do simple tasks such as grooming, and problemsdevelop with speaking, understanding, reading, or writing. Later stageAD patients may become anxious or aggressive, may wander away from homeand ultimately need total care.

Presently, the only definite way to diagnose AD is to identify plaquesand tangles in brain tissue in an autopsy after death of the individual.Therefore, doctors can only make a diagnosis of “possible” or “probable”AD while the person is still alive. Using current methods, physicianscan diagnose AD correctly up to 90 percent of the time using severaltools to diagnose “probable” AD. Physicians ask questions about theperson's general health, past medical problems, and the history of anydifficulties the person has carrying out daily activities. Behavioraltests of memory, problem solving, attention, counting, and languageprovide information on cognitive degeneration and medical tests such astests of blood, urine, or spinal fluid, and brain scans can provide somefurther information.

The management of AD consists of medication-based and non-medicationbased treatments. Treatments aimed at changing the underlying course ofthe disease (delaying or reversing the progression) have so far beenlargely unsuccessful. Medicines that restore the deficit (defect), ormalfunctioning, in the chemical messengers of the nerve cells(neurotransmitters), in particular the cholinesterase inhibitors (ChEIs)such as tacrine and rivastigmine, have been shown to improve symptoms.ChEIs impede the enzymatic degradation of neurotransmitters therebyincreasing the amount of chemical messengers available to transmit thenerve signals in the brain.

For some people in the early and middle stages of the disease, the drugstacrine (COGNEX®, Morris Plains, N.J.), donepezil (ARICEPT®, Tokyo, JP),rivastigmine (EXELON®, East Hanover, N.J.), or galantamine (REMINYL®,New Brunswick, N.J.) may help prevent some symptoms from becoming worsefor a limited time. Another drug, memantine (NAMENDA®, New York, N.Y.),has been approved for treatment of moderate to severe AD. Medicationsare also available to address the psychiatric manifestations of AD.Also, some medicines may help control behavioral symptoms of AD such assleeplessness, agitation, wandering, anxiety, and depression. Treatingthese symptoms often makes patients more comfortable and makes theircare easier for caregivers. Unfortunately, despite significant treatmentadvances showing that this class of agents is consistently better than aplacebo, the disease continues to progress, and the average effect onmental functioning has only been modest. Many of the drugs used in ADmedication such as, for example, ChEIs also have side effects thatinclude gastrointestinal dysfunction, liver toxicity and weight loss.

Lewy body dementia (LBD) is a neurodegenerative disorder that can occurin persons older than 65 years of age, which typically causes symptomsof cognitive (thinking) impairment and abnormal behavioral changes.Symptoms can include cognitive impairment, neurological signs, sleepdisorder, and autonomic failure. Cognitive impairment is the presentingfeature of LBD in most cases. Patients have recurrent episodes ofconfusion that progressively worsen. The fluctuation in cognitiveability is often associated with shifting degrees of attention andalertness. Cognitive impairment and fluctuations of thinking may varyover minutes, hours, or days.

Lewy bodies are formed from phosphorylated and nonphosphorylatedneurofilament proteins; they contain the synaptic proteinalpha-synuclein as well as ubiquitin, which is involved in theelimination of damaged or abnormal proteins. In addition to Lewy Bodies,Lewy neurites, which are inclusion bodies in the cell processes of thenerve cells, may also be present. Amyloid plaques may form in the brainsof patients afflicted with DLB, however they tend to be fewer in numberthan seen in patients with Alzheimer's disease. Neurofibrillary tangles,the other micropathological hallmark of AD, are not a maincharacteristic of DLB but are frequently present in addition to amyloidplaques.

Amyotrophic lateral sclerosis (ALS) is characterized by degeneration ofupper and lower motor neurons. In some ALS patients, dementia or aphasiamay be present (ALS-D). The dementia is most commonly a frontotemporaldementia (FTD), and many of these cases have ubiquitin-positive,tau-negative inclusions in neurons of the dentate gyrus and superficiallayers of the frontal and temporal lobes.

Inclusion-body myositis (IBM) is a crippling disease usually found inpeople over age 50, in which muscle fibers develop inflammation andbegin to atrophy—but in which the brain is spared and patients retaintheir full intellect. Two enzymes involved in the production ofamyloid-β protein were found to be increased inside the muscle cells ofpatients with this most common, progressive muscle disease of olderpeople, in which amyloid-β is also increased.

Another disease that is based on or associated with the accumulation anddeposit of amyloid-like protein is macular degeneration.

Macular degeneration is a common eye disease that causes deteriorationof the macula, which is the central area of the retina (the paper-thintissue at the back of the eye where light-sensitive cells send visualsignals to the brain). Sharp, clear, ‘straight ahead’ vision isprocessed by the macula. Damage to the macula results in the developmentof blind spots and blurred or distorted vision. Age-related maculardegeneration (AMD) is a major cause of visual impairment in the UnitedStates and for people over age 65 it is the leading cause of legalblindness among Caucasians. Approximately 1.8 million Americans age 40and older have advanced AMD, and another 7.3 million people withintermediate AMD are at substantial risk for vision loss. The governmentestimates that by 2020 there will be 2.9 million people with advancedAMD. Victims of AMD are often surprised and frustrated to find out howlittle is known about the causes and treatment of this blindingcondition.

There are two forms of macular degeneration: dry macular degenerationand wet macular degeneration. The dry form, in which the cells of themacula slowly begin to break down, is diagnosed in 85 percent of maculardegeneration cases. Both eyes are usually affected by dry AMD, althoughone eye can lose vision while the other eye remains unaffected. Drusen,which are yellow deposits under the retina, are common early signs ofdry AMD. The risk of developing advanced dry AMD or wet AMD increases asthe number or size of the drusen increases. It is possible for dry AMDto advance and cause loss of vision without turning into the wet form ofthe disease; however, it is also possible for early-stage dry AMD tosuddenly change into the wet form.

The wet form, although it only accounts for 15 percent of the cases,results in 90 percent of the blindness, and is considered advanced AMD(there is no early or intermediate stage of wet AMD). Wet AMD is alwayspreceded by the dry form of the disease. As the dry form worsens, somepeople begin to have abnormal blood vessels growing behind the macula.These vessels are very fragile and will leak fluid and blood (hence‘wet’ macular degeneration), causing rapid damage to the macula.

The dry form of AMD will initially often cause slightly blurred vision.The center of vision in particular may then become blurred and thisregion grows larger as the disease progresses. No symptoms may benoticed if only one eye is affected. In wet AMD, straight lines mayappear wavy and central vision loss can occur rapidly.

Diagnosis of macular degeneration typically involves a dilated eye exam,visual acuity test, and a viewing of the back of the eye using aprocedure called fundoscopy to help diagnose AMD, and—if wet AMD issuspected—fluorescein angiography may also be performed. If dry AMDreaches the advanced stages, there is no current treatment to preventvision loss. However, a specific high dose formula of antioxidants andzinc may delay or prevent intermediate AMD from progressing to theadvanced stage. Macugen® (pegaptanib sodium injection), laserphotocoagulation and photodynamic therapy can control the abnormal bloodvessel growth and bleeding in the macula, which is helpful for somepeople who have wet AMD; however, vision that is already lost will notbe restored by these techniques. If vision is already lost, low visionaids exist that can help improve the quality of life.

One of the earliest signs of age-related macular degeneration (AMD) isthe accumulation of extracellular deposits known as drusen between thebasal lamina of the retinal pigmented epithelium (RPE) and Bruch'smembrane (BM). Recent studies conducted by Anderson et al. haveconfirmed that drusen contains amyloid beta. (Experimental Eye Research78 (2004) 243-256).

Ongoing research continues with studies exploring environmental,genetic, and dietary factors that may contribute to AMD. New treatmentstrategies are also being explored, including retinal cell transplants,drugs that will prevent or slow down the progress of the disease,radiation therapy, gene therapies, a computer chip implanted in theretina that may help stimulate vision and agents that will prevent thegrowth of new blood vessels under the macula.

An important factor to consider when developing new drugs is the ease ofuse for the target patients. Oral drug delivery, —specifically tablets,capsules and softgels—, account for 70% of all dosage forms consumedbecause of patient convenience. Drug developers agree that patientsprefer oral delivery rather than subjecting themselves to injections orother, more invasive forms of medicinal administration. Formulationsresulting in low dosing intervals (i.e. once a day or sustained release)are also preferable. The ease of administering antibiotics in oraldosage forms results in an increase of patient compliance duringtreatment.

What is needed are effective methods and compositions for preventing oraddressing the complications associated with amyloidosis, a group ofdiseases and disorders associated with amyloid plaque formationincluding secondary amyloidosis and age-related amyloidosis including,but not limited to, neurological disorders such as Alzheimer's Disease(AD), Lewy body dementia, Down's syndrome, hereditary cerebralhemorrhage with amyloidosis (Dutch type); the Guam Parkinson-Dementiacomplex; as well as other diseases which are based on or associated withamyloid-like proteins such as progressive supranuclear palsy, multiplesclerosis; Creutzfeld Jacob disease, Parkinson's disease, HIV-relateddementia, ALS (amyotropic lateral sclerosis), Adult Onset Diabetes;senile cardiac amyloidosis; endocrine tumors, and others, includingmacular degeneration. In particular what is needed are agents capable ofcounteracting the physiological manifestations of the disease such asthe formation of plaques associated with aggregation of fibers of theamyloid or amyloid-like peptide.

Anti-amyloid antibodies elicited by the inoculation of Aβ₁₋₄₂ mixed withFreund complete or incomplete adjuvant were reported to reduce theamyloid burden in transgenic mice for human Alzheimer disease (Schenk etal., 1999). Intraperitoneal inoculation of tetrapalmitoylated Aβ₁₋₁₆reconstituted in liposomes to NORBA transgenic mice elicited significanttiters of anti-amyloid antibodies, which were reported to solubilizeamyloid fibers and plaques in vitro and in vivo. (Nicolau et al., 2002).

A possible mechanism by which the dissolution of amyloid plaques andfibres occurred was first suggested by Bard et al., (2000), whoconcluded that the antibodies opsonized the plaques, which weresubsequently destroyed by the macrophages of the microglia. De Mattos etal., (2001) indicated that a mAb directed against the central domain ofβ-amyloid was able to bind and completely sequester plasma amyloid. Theyargued that the presence of these mAbs in circulation shifted theequilibrium of Aβ between brain and plasma, favoring the peripheralclearing and catabolism instead of deposition within the brain.

Prolonged human therapy with rodent antibodies may result in anantiglobulin response which is detectable at about 8-12 days afteradministration and reaches a peak at about 20-30 days. If such anantiglobulin response is encountered, the treatment must be discontinuedafter not more than about 10 days and re-treatment at a latter date isusually precluded because it will lead to rapid onset of a secondaryantiglobulin response. Although rodent antibodies share a considerabledegree of sequence conservation with that of human antibodies, there aremany sequence differences between rodents and human antibodiessufficient for the rodent antibodies to be immunogenic in humans.

This problem may be overcome by generating antibodies directly in humansor by the creation of “humanized’ (a.k.a. “reshaped’ antibodies).Humanized antibodies have a variable region amino acid sequence thatcontains the rodent-derived CDRs interspersed into human or human-likeframework sequences. Since the specificity of the humanized antibody isprovided by the rodent-derived CDRs, their residues are to be usedessentially unchanged with only minor modifications being allowable,which do not significantly interfere with the affinity and specificityof the antibody for its target antigen. Framework residues may bederived from any primate or, particularly, from any human variableregion or may be a combination thereof and the resultant designedvariable region would be considered reshaped.

To maximise the likelihood that affinity will be retained in thereshaped antibody it is important to make a proper selection of theframework region. It is known that the framework sequences serve to holdthe CDRs in their correct spatial orientation for interaction withantigen, and that framework residues can sometimes even participate inantigen binding. In order to maintain the affinity of the antibody forits antigen it is advantageous to select human framework sequences thatare most similar to the sequences of the rodent frameworks. It then maystill be necessary to replace one or more amino acids in the humanframework sequence with the corresponding residue in the rodentframework to avoid losses with the affinity. This replacement may beaided by computer modelling.

The present invention provides novel methods and compositions comprisinghighly specific and highly effective antibodies, particularly chimericantibodies including fragments thereof, more particularly partially orfully humanized antibodies including fragments thereof, having theability to specifically recognize and bind to specific epitopes from arange of β-amyloid antigens, which my be presented to the antibody in amonomeric, dimeric, trimeric, etc, a polymeric form, in form of anaggregate, fibers, filaments or in the condensed form of a plaque. Theantibodies enabled by the teaching of the present invention areparticularly useful for the treatment of amyloidosis, a group ofdiseases and disorders associated with amyloid plaque formationincluding secondary amyloidosis and age-related amyloidosis including,but not limited to, neurological disorders such as Alzheimer's Disease(AD), Lewy body dementia, Down's syndrome, hereditary cerebralhemorrhage with amyloidosis (Dutch type); the Guam Parkinson-Dementiacomplex; as well as other diseases which are based on or associated withamyloid-like proteins such as progressive supranuclear palsy, multiplesclerosis; Creutzfeld Jacob disease, hereditary cerebral hemorrhage withamyloidosis Dutch type, Parkinson's disease, HIV-related dementia, ALS(amyotropic lateral sclerosis), Adult Onset Diabetes; senile cardiacamyloidosis; endocrine tumors, and others, including maculardegeneration, to name just a few.

SUMMARY OF THE INVENTION

In one embodiment, the invention relates to a chimeric antibody or afragment thereof, or a humanized antibody or a fragment thereof, whichrecognizes and binds to at least one distinct binding site, particularlyto a least two distinct binding sites, and more particularly to at leastthree distinct binding sites on the β-amyloid protein wherein said one,said at least two and said at least three binding sites each comprise atleast one or two consecutive amino acid residues predominantly involvedin the binding of the antibody.

In particular, the chimeric antibody or a fragment thereof, or thehumanized antibody or a fragment thereof according to the inventionbinds to at least two, particularly to at least three distinct bindingsites on the β-amyloid protein wherein at least two of the threedistinct binding sites comprise at least two consecutive amino acidresidues predominantly involved in the binding of the antibody and atleast one of the three distinct binding sites comprise at least oneamino acid residue.

The at least two distinct binding sites comprising at least twoconsecutive amino acid residues predominantly involved in the binding ofthe antibody are located in close proximity to each other on theantigen, separated and/or flanked by at least one amino acid residue notinvolved in antibody binding or to a significantly smaller extent ascompared to said at least two consecutive amino acid residues, thusforming a conformational discontinuous epitope.

The at least three distinct binding sites comprising at least twoconsecutive amino acid residues and at least one amino acid residue,respectively, which are predominantly involved in the binding of theantibody are located in close proximity to each other on the epitope,separated and/or flanked by at least one amino acid residue not involvedin antibody binding or to a significantly smaller extent as compared tothe amino acid residues, which are predominantly involved in the bindingof the antibody, thus forming a conformational discontinuous epitope.

In particular, a chimeric antibody or a fragment thereof, or a humanizedantibody or a fragment thereof is provided, which recognizes and bindsto at least one distinct binding site, particularly to a least twodistinct binding sites, more particularly to at least three distinctbinding sites on the β-amyloid protein wherein said at least one or saidat least two distinct binding sites each comprise at least twoconsecutive amino acid residues predominantly involved in the binding ofthe antibody, wherein the at least two consecutive amino acid residuesrepresenting a first binding site are -Phe-Phe- embedded within thefollowing core sequence (SEQ ID NO: 9):

Xaa₃-Phe-Phe-Xaa₄-Xaa₅-Xaa₆,

-   -   wherein    -   Xaa₃ is an amino acid residue selected from the group consisting        of Ala, Val, Leu, norleucine, Met, Phe, and Ile;    -   Xaa₄ is an amino acid residue selected from the group consisting        of Ala, Val, Leu, Ser and Ile;    -   Xaa₅ is an amino acid residue selected from the group consisting        of Glu and Asp,    -   Xaa₆ is an amino acid residue selected from the group consisting        of Glu and Asp, and wherein said amino acid residues Xaa₃ Xaa₄,        Xaa₅ and Xaa₆ are not involved in antibody binding or to a        significantly smaller extent as compared to the -Phe-Phe-        binding site.

In another embodiment of the invention, a chimeric antibody or afragment thereof, or a humanized antibody or a fragment thereof isprovided, wherein

-   -   Xaa₃ is Val or Leu, but particularly Val;    -   Xaa₄ is Ala or Val, but particularly Ala;    -   Xaa₅ is Glu or Asp, but particularly Glu;    -   Xaa₆ is Glu or Asp, but particularly Asp.

In particular, a chimeric antibody or a fragment thereof, or a humanizedantibody or a fragment thereof is provided, which recognizes and bindsto at least one distinct binding site, particularly to a least twodistinct binding sites, more particularly to at least three distinctbinding sites on the β-amyloid protein wherein said distinct bindingsites comprise at least one and at least two consecutive amino acidresidues, respectively, predominantly involved in the binding of theantibody, wherein the at least two consecutive amino acid residuesrepresenting a first binding site are -Phe-Phe- and the at least oneamino acid residue is -His- embedded within the following core sequence:

-Xaa₁-His-Xaa₃-Xaa₄-Xaa₅-Xaa₆-Phe-Phe-Xaa₇-Xaa₈-Xaa₉-,

-   -   wherein    -   Xaa₁ is an amino acid residue selected from the group consisting        of His, Asn, Gln, Lys and Arg    -   Xaa₃ is an amino acid residue selected from the group consisting        of Asn and Gln    -   Xaa₄ is an amino acid residue selected from the group consisting        of His, Asn, Gln, Lys and Arg    -   Xaa₅ is an amino acid residue selected from the group consisting        of Ala, Val, Leu, Ser and Ile;    -   Xaa₆ is an amino acid residue selected from the group consisting        of Ala, Val, Leu, norleucine, Met, Phe, and Ile    -   Xaa₇ is an amino acid residue selected from the group consisting        of Ala, Val, Leu and Ile    -   Xaa₈ is an amino acid residue selected from the group consisting        of Glu and Asp,    -   Xaa₉ is an amino acid residue selected from the group consisting        of Glu and Asp, and wherein said amino acid residues Xaa₁, Xaa₃,        Xaa₈, Xaa₇, Xaa₈ and Xaa₉, are not involved in antibody binding        or to a smaller to significantly smaller extent as compared to        the -His- and the -Phe-Phe- binding site, respectively.

In another embodiment of the invention, a chimeric antibody or afragment thereof, or a humanized antibody or a fragment thereof isprovided, wherein

-   -   Xaa₃ is Gln or Asn, but particularly Gln;    -   Xaa₄ is Lys    -   Xaa₅ is Leu    -   Xaa₆ is Val or Leu, but particularly Val;    -   Xaa₇ is Ala or Val, but particularly Ala;    -   Xaa₈ is Glu or Asp, but particularly Glu; and    -   Xaa₉ is Asp or Glu, but particularly Asp.

In another embodiment of the invention, a chimeric antibody or afragment thereof, or a humanized antibody or a fragment thereof isprovided, which recognizes and binds to at least one distinct bindingsite, particularly to a least two distinct binding sites, moreparticularly to at least three distinct binding sites on the β-amyloidprotein, wherein said at least one or said at least two distinct bindingsites each comprise at least two consecutive amino acid residuespredominantly involved in the binding of the antibody, wherein the atleast two consecutive amino acid residues representing a second bindingsite are -Lys-Leu- embedded within the following core sequence (SEQ IDNO: 10):

Xaa₁-Xaa₂-Lys-Leu-Xaa₃

-   -   wherein    -   Xaa₁ is an amino acid residue selected from the group consisting        of His, Asn, Gln Lys, and Arg;    -   Xaa₂ is an amino acid residue selected from the group consisting        of Asn and Gln;    -   Xaa₃ is an amino acid residue selected from the group consisting        of Ala, Val, Leu, norleucine, Met, Phe, and Ile; and wherein        said amino acid residues Xaa₂, Xaa₃, are not involved in        antibody binding or to a smaller to significantly smaller extent        as compared to the -Lys-Leu- binding site.

In another embodiment of the invention, a chimeric antibody or afragment thereof, or a humanized antibody or a fragment thereof isprovided, which recognizes and binds to at least one distinct bindingsite, particularly to a least two distinct binding sites, moreparticularly to at least three distinct binding sites on the β-amyloidprotein wherein said distinct binding sites comprise at least one and atleast two consecutive amino acid residues, respectively, predominantlyinvolved in the binding of the antibody, wherein the at least one andthe at least two consecutive amino acids, which are separated by atleast one amino acid residue not involved in antibody binding or to asignificantly smaller extent as compared to the amino acid residuespredominantly involved in the binding of the antibody, are -His- and-Lys-Leu-, respectively, embedded within the following core sequence:

His-Xaa₂-Lys-Leu-Xaa₃-Xaa₄-Xaa₅-Xaa₆- -Xaa₇-Xaa₈-

-   -   wherein    -   Xaa₂ is an amino acid residue selected from the group consisting        of Asn and Gln;    -   Xaa₃ is an amino acid residue selected from the group consisting        of Ala, Val, Leu, norleucine, Met, Phe, and Ile;    -   Xaa₄ is an amino acid residue selected from the group consisting        of Ala, Val, Leu, norleucine, Met, Phe, and Ile    -   Xaa₅ is an amino acid residue selected from the group consisting        of Ala, Val, Leu, norleucine, Met, Phe, and Ile    -   Xaa₆ is an amino acid residue selected from the group consisting        of Ala, Val, Leu, Ser and Ile;    -   Xaa₇ is an amino acid residue selected from the group consisting        of Glu and Asp,    -   Xaa₈ is an amino acid residue selected from the group consisting        of Glu and Asp    -   and wherein said amino acid residues Xaa₂, Xaa₃, Xaa₆, Xaa₇,        Xaa₈, are not involved in antibody binding or to a smaller to        significantly smaller extent as compared to the -His- and the        -Lys-Leu- binding site, respectively.

In another embodiment of the invention, a chimeric antibody or afragment thereof, or a humanized antibody or a fragment thereof isprovided, wherein

-   -   Xaa₂ is Gln or Asn, but particularly Gln;    -   Xaa₃ is Val or Leu, but particularly Val;    -   Xaa₄ is Phe    -   Xaa₅ is Phe    -   Xaa₆ is Ala or Val, but particularly Ala;    -   Xaa₇ is Glu or Asp, but particularly Glu; and    -   Xaa₈ is Asp or Glu, but particularly Asp.

In another embodiment of the invention, a chimeric antibody or afragment thereof, or a humanized antibody or a fragment thereof isprovided, which recognizes and binds to at least two distinct bindingsites on the β-amyloid protein wherein said at least two distinctbinding sites each comprise at least two consecutive amino acid residuespredominantly involved in the binding of the antibody, wherein the atleast two consecutive amino acids are separated by at least one aminoacid residue not involved in antibody binding or to a significantlysmaller extent than said consecutive amino acid residues, which are-Phe-Phe- and -Lys-Leu-, respectively, representing a first and secondbinding site embedded within the following core sequence:

Xaa₁-Xaa₂-Lys-Leu-Xaa₃-Phe-Phe-Xaa₄-Xaa₅-Xaa₆,

-   -   wherein    -   Xaa₁ is an amino acid residue selected from the group consisting        of His, Asn, Gln Lys, and Arg;    -   Xaa₂ is an amino acid residue selected from the group consisting        of Asn and Gln;    -   Xaa₃ is an amino acid residue selected from the group consisting        of Ala, Val, Leu, norleucine, Met, Phe, and Ile;    -   Xaa₄ is an amino acid residue selected from the group consisting        of Ala, Val, Leu, Ser and Ile;    -   Xaa₅ is an amino acid residue selected from the group consisting        of Glu and Asp,    -   Xaa₆ is an amino acid residue selected from the group consisting        of Glu and Asp and wherein said amino acid residues Xaa₂, Xaa₃,        Xaa₄, Xaa₅ and Xaa₆ are not involved in antibody binding or to a        smaller to significantly smaller extent as compared to the        -Lys-Leu- and -Phe-Phe- binding site, respectively.

In another embodiment of the invention, a chimeric antibody or afragment thereof, or a humanized antibody or a fragment thereof isprovided, which recognizes and binds to at least one distinct bindingsite, particularly to a least two distinct binding sites, moreparticularly to at least three distinct binding sites on the β-amyloidprotein wherein said distinct binding sites comprise at least one and atleast two consecutive amino acid residues, respectively, predominantlyinvolved in the binding of the antibody, wherein the at least one andthe at least two consecutive amino acids are separated by at least oneamino acid residue not involved in antibody binding or to asignificantly smaller extent as compared to the amino acid residues,which are predominantly involved in the binding of the antibody, andwherein said amino acid residues are -His- and -Phe-Phe- and -Lys-Leu-,respectively, embedded within the following core sequence:

His-Xaa₂-Lys-Leu-Xaa₃-Phe-Phe-Xaa₄₋Xaa₅₋Xaa₆,

-   -   wherein    -   Xaa₂ is an amino acid residue selected from the group consisting        of Asn and Gln;    -   Xaa₃ is an amino acid residue selected from the group consisting        of Ala, Val, Leu, norleucine, Met, Phe, and Ile;    -   Xaa₄ is an amino acid residue selected from the group consisting        of Ala, Val, Leu, Ser and Ile;    -   Xaa₅ is an amino acid residue selected from the group consisting        of Glu and Asp,    -   Xaa₆ is an amino acid residue selected from the group consisting        of Glu and Asp, and wherein said amino acid residues Xaa₂, Xaa₃,        Xaa₄, Xaa₅, Xaa₆, are not involved in antibody binding or to a        smaller to significantly smaller extent as compared to the        -His-, the -Lys-Leu- and the -Phe-Phe- binding site,        respectively.

In another embodiment of the invention, a chimeric antibody or afragment thereof, or a humanized antibody or a fragment thereof isprovided, wherein

-   -   Xaa₂ is Gln or Asn, but particularly Gln;    -   Xaa₃ is Val or Leu, but particularly Val;    -   Xaa₄ is Ala or Val, but particularly Ala;    -   Xaa₅ is Glu or Asp, but particularly Glu; and    -   Xaa₆ is Asp or Glu, but particularly Asp.

In another embodiment of the invention, a chimeric antibody or afragment thereof, or a humanized antibody or a fragment thereof isprovided, which recognizes and binds to at least two distinct bindingsites on the β-amyloid protein wherein said at least two distinctbinding sites each comprise at least two consecutive amino acid residuespredominantly involved in the binding of the antibody, wherein the atleast two consecutive amino acids are separated by at least one aminoacid residue not involved in antibody binding or to a significantlysmaller extent than said consecutive amino acid residues, which are-Phe-Phe- and -Lys-Leu-, respectively, representing a first and secondbinding site embedded within the following core sequence:

Xaa₁-Xaa₂-Lys-Leu-Xaa₃-Phe-Phe-Xaa₄-Xaa₅-Xaa₆,

-   -   wherein    -   Xaa₁ is an amino acid residue selected from the group consisting        of His, Asn, Gln, Lys and Arg;    -   Xaa₂ is an amino acid residue selected from the group consisting        of Asn and Gln;    -   Xaa₃ is an amino acid residue selected from the group consisting        of Val, Ala, Leu, Met, Phe, norleucine and Ile    -   Xaa₄ is an amino acid residue selected from the group consisting        of Ala, Val, Leu and Ile;    -   Xaa₅ is an amino acid residue selected from the group consisting        of Glu and Asp,    -   Xaa₆ is an amino acid residue selected from the group consisting        of Glu and Asp, and wherein said amino acid residues Xaa₂, Xaa₃,        Xaa₄, Xaa_(s), Xaa₆, are not involved in antibody binding or to        a smaller to significantly smaller extent as compared to the        -Lys-Leu- and the -Phe-Phe binding site, respectively.

In another embodiment of the invention, a chimeric antibody or afragment thereof, or a humanized antibody or a fragment thereof isprovided, wherein

-   -   Xaa₁ is His or Arg, but particularly His;    -   Xaa₂ is Gln or Asn, but particularly Gln;    -   Xaa₃ is Val or Leu, but particularly Val;    -   Xaa₄ is Ala or Val, but particularly Ala;    -   Xaa₅ is Glu or Asp, but particularly Glu; and    -   Xaa₆ is Asp or Glu, but particularly Asp.

In one embodiment of the invention, a chimeric antibody or a fragmentthereof, or a humanized antibody or a fragment thereof is provided whichrecognizes and binds to at least two distinct binding sites on theβ-amyloid protein wherein said at least two distinct binding sites eachcomprise at least two consecutive amino acid residues predominantlyinvolved in the binding of the antibody, which are -Phe-Phe-Ala-Glu-,particularly -Phe-Phe-Ala-, but especially -Phe-Phe- and -Lys-Leu-,respectively, and wherein said at least two distinct binding sitesexhibit amino acid sequence -Val-Phe-Phe-Ala-Glu-Asp- shown in SEQ IDNO: 7 and amino acid sequence His-Gln-Lys-Leu-Val- shown in SEQ ID NO:8, respectively.

In one embodiment of the invention, a chimeric antibody or a fragmentthereof, or a humanized antibody or a fragment thereof is provided,which recognizes and binds to at least one distinct binding site,particularly to a least two distinct binding sites, more particularly toat least three distinct binding sites on the β-amyloid protein whereinthe said at least one or said at least two distinct binding sitescomprise at least one and at least two consecutive amino acid residues,respectively, predominantly involved in the binding of the antibody,which are -Phe-Phe- and -Lys-Leu-, and -His-, respectively, wherein saiddistinct binding sites are embedded in the amino acid sequence-Val-Phe-Phe-Ala-Glu-, and amino acid sequence -His-Gln-Lys-Leu-Val-,respectively.

In another embodiment of the invention, the chimeric antibody or afragment thereof, or a humanized antibody or a fragment thereofcomprises an antigen recognition and binding site which recognizes andbinds to at least two distinct binding sites on the β-amyloid proteinwherein said at least two distinct binding sites each comprise at leasttwo consecutive amino acid residues within the amino acid sequence givenin SEQ ID NOs: 7 and 8, respectively, wherein said consecutive aminoacid residues, particularly -Phe-Phe- and -Lys-Leu-, are predominantlyinvolved in the binding of the β-amyloid protein.

In a further specific embodiment of the invention, an antibody or afragment thereof according to the invention is provided, which binds to4 distinct binding sites on the β-amyloid protein wherein said 4distinct binding sites include 2 binding sites each comprising one aminoacid residue and 2 binding sites each comprising two consecutive aminoacid residues, which residues are predominantly involved in the bindingof the antibody, wherein said 4 distinct binding sites are located inclose proximity to each other on the β-amyloid protein, and wherein said4 binding sites are separated by at least one amino acid residue notinvolved in antibody binding or involved in binding but to asignificantly smaller extent as compared to said one amino acid residueand said two consecutive amino acid residues of the 4 distinct bindingsites thus forming a conformational discontinuous epitope.

In particular, the first of the two consecutive amino acid residuespredominantly involved in the binding of the antibody is -Lys-Leu-, andthe second of the at least two consecutive amino acid residues is-Phe-Phe-, the first of the single amino acid residues is -His- and thesecond of the single amino acid residues is -Asp- embedded within thefollowing core sequence:

-Xaa₁-His-Xaa₂-Lys-Leu-Xaa₃-Phe-Phe-Xaa₄-Xaa₅- Asp-Xaa₆

-   -   wherein    -   Xaa₁ is an amino acid residue selected from the group consisting        of His, Asn, Gln, Lys and Arg, but particularly His;    -   Xaa₂ is an amino acid residue selected from the group consisting        of Asn and Gln, but particularly Gln ;    -   Xaa₃ is an amino acid residue selected from the group consisting        of Ala, Val, Leu, norleucine, Met, Phe, and Ile, particularly        Val;    -   Xaa₄ is an amino acid residue selected from the group consisting        of Ala, Val, Leu, Ser and Ile, particularly Ala;    -   Xaa₅ is an amino acid residue selected from the group consisting        of Glu and Asp, particularly Glu;    -   Xaa₆ is an amino acid residue selected from the group consisting        of Ala, Val, Leu, norleucine, Met, Phe, and Ile, particularly        Val; and wherein said amino acid residues Xaa₁, Xaa₂, Xaa₃,        Xaa₄, Xaa₅, Xaa₆, are not involved in antibody binding or are        involved in binding but to a significantly smaller extent as        compared to the -His-, -Asp-, the -Lys-Leu, and the -Phe-Phe-        binding site.

In one embodiment, the invention relates to an antibody or a fragmentthereof according to the invention, which binds to 4 distinct bindingsites on the β-amyloid protein, wherein said 4 distinct binding sitesinclude two binding sites each comprising one amino acid residue and twobinding sites each comprising two consecutive amino acid residues,wherein the first of the two consecutive amino acid residuespredominantly involved in the binding of the antibody is -Lys-Leu-, andthe second of the at least two consecutive amino acid residues is-Phe-Phe-, the first of the single amino acid residues is -His- and thesecond of the single amino acid residues is -Asp- embedded within thefollowing core sequence:

-Xaa₁-His-Xaa₂-Lys-Leu-Xaa₃-Phe-Phe-Xaa₄-Xaa₅-Asp-Xaa₆

-   -   wherein    -   Xaa₁ is an amino acid residue selected from the group consisting        of His, Asn, Gln, Lys and Arg, but particularly His;    -   Xaa₂ is an amino acid residue selected from the group consisting        of Asn and Gln, but particularly Gln ;    -   Xaa₃ is an amino acid residue selected from the group consisting        of Ala, Val, Leu, norleucine, Met, Phe, and Ile, particularly        Val;    -   Xaa₄ is an amino acid residue selected from the group consisting        of Ala, Val, Leu, Ser and Ile, particularly Ala;    -   Xaa₅ is an amino acid residue selected from the group consisting        of Glu and Asp, particularly Glu;    -   Xaa₆ is an amino acid residue selected from the group consisting        of Ala, Val, Leu, norleucine, Met, Phe, and Ile, particularly        Val; and wherein said amino acid residues Xaa₁, Xaa₂, Xaa₃,        Xaa₄, Xaa₅, Xaa₆, are not involved in antibody binding or are        involved in binding but to a significantly smaller extent as        compared to the -His-, -Asp-, the -Lys-Leu, and the -Phe-Phe-        binding site.

In a specific embodiment of the invention, the recognition and bindingsites as defined herein before are forming a conformationaldiscontinuous epitope localized in a region of the β-amyloid proteinbetween amino acid residue 12 to 24, particularly between residues 14 to23, more particularly between amino acid residues 14 and 20, wherein theat least two distinct recognition and binding sites each comprising atleast 2 amino acid residues, are located at position 16 and 17 and atposition 19 and 20, respectively, and wherein the at least one distinctrecognition and binding site comprising at least 1 amino acid residue islocated at position 14, which residues are predominantly involved in thebinding of the β-amyloid protein and wherein said distinct recognitionand binding sites are at least on one side flanked by amino acidresidues, particularly residues 21 and 22, and separated by one aminoacid residue located at position 15 and 18, which amino acid residuesare not directly involved in the binding of the antigen or, at least, toa substantially smaller extent.

In still another embodiment of the invention the said at least threedistinct recognition and binding sites are flanked on both sides byamino acid residues, particularly residues 12 and 13, and residues 21and 22 and are separated by one amino acid residue located at position15 and 18, which amino acid residues are not directly involved in thebinding of the antigen or, at least, to a substantially smaller extent.

In a specific embodiment, said consecutive amino acid residues,particularly -Lys-Leu- at position 16 and 17 and -Phe-Phe- at position19 and 20, which are predominantly involved in the binding of theβ-amyloid protein, are embedded into the following core region:

Val- His- His- Gln- Lys- Leu- Val- Phe- Phe- Ala- 12 13 14 15 16 17 1819 20 21 Glu- Asp 22 23

In another specific embodiment, said amino acid residues, particularly-Lys-Leu- at position 16 and 17 and -Phe-Phe- at position 19 and 20, and-His- at position 14, which are predominantly involved in the binding ofthe β-amyloid protein, are embedded into the following core region:

Val- His- His- Gln- Lys- Leu- Val- Phe- Phe- Ala- 12 13 14 15 16 17 1819 20 21 Glu- Asp- Val- Gly- 22 23 24 25

In another embodiment of the invention, a humanized antibody or afragment thereof is provided which comprises in the light chain andheavy chain variable region, respectively, at least one CDR of non-humanorigin, particularly two CDRs of non-human origin, more particularlythree CDR of non-human origin, embedded in one or more human- orprimate-derived framework regions and, optionally, a constant regionderived from a human or primate source antibody, which humanizedantibody or fragment thereof is capable of specifically recognizing andbinding β-amyloid protein, particularly a β-amyloid monomeric peptide,more particularly a β-amyloid polymeric peptide, even more particularlyβ-amyloid fibers, fibrils or filaments in isolation or as part of aβ-amyloid plaque, at an epitope comprising the following amino acidsequence (SEQ ID NO: 11):

Xaa₁-Xaa₂-Lys-Leu-Xaa₃-Phe-Phe-Xaa₄-Xaa₅-Xaa₆,

-   -   wherein    -   Xaa₁ is an amino acid residue selected from the group consisting        of His, Asn, Gln, but particularly His;    -   Xaa₂ is an amino acid residue selected from the group consisting        of Asn and Gln, but particularly Gln; and    -   Xaa₃ is an amino acid residue selected from the group consisting        of Val, Leu, and Ile, but particularly Val;    -   Xaa₄ is an amino acid residue selected from the group consisting        of Ala and Val, but particularly Ala;    -   Xaa₅ is an amino acid residue selected from the group consisting        of Glu and Asp, but particularly Glu;    -   Xaa₆ is an amino acid residue selected from the group consisting        of Glu and Asp, but particularly Asp.

In still another embodiment of the invention, a humanized antibody or afragment thereof is provided which comprises in the light chain andheavy chain variable region, respectively, at least one CDR of non-humanorigin, particularly two CDRs of non-human origin, more particularlythree CDR of non-human origin, embedded in one or more human- orprimate-derived framework regions and, optionally, a constant regionderived from a human or primate source antibody, which humanizedantibody or fragment thereof is capable of specifically recognizing andbinding β-amyloid protein, particularly a β-amyloid monomeric peptide,more particularly a β-amyloid polymeric peptide, even more particularlyβ-amyloid fibers, fibrils or filaments in isolation or as part of aβ-amyloid plaque, at an epitope comprising the following amino acidsequence:

His-Xaa₂-Lys-Leu-Xaa₃-Phe-Phe-Xaa₄-Xaa₅-Xaa₆,

-   -   wherein    -   Xaa₂ is an amino acid residue selected from the group consisting        of Asn and Gln, but particularly Gln; and    -   Xaa₃ is an amino acid residue selected from the group consisting        of Val, Leu, and Ile, but particularly Val;    -   Xaa₄ is an amino acid residue selected from the group consisting        of Ala and Val, but particularly Ala;    -   Xaa₅ is an amino acid residue selected from the group consisting        of Glu and Asp, but particularly Glu;    -   Xaa₆ is an amino acid residue selected from the group consisting        of Glu and Asp, but particularly Glu; and wherein said amino        acid residues Xaa₂, Xaa₃, Xaa₄, Xaa₅, Xaa₆, are not involved in        antibody binding or to a smaller extent as compared to the -His-        and the -Lys-Leu- and the -Phe-Phe- binding site.

In a specific embodiment of the invention, the CDR of non-human originis obtained from a donor antibody, but particularly from a murine donorantibody, raised against an antigen fragment which does not contain saiddistinct binding site. This shift in the epitopic region may have atleast partially been caused by the use of a supramolecular antigenicconstruct comprising an antigenic peptide corresponding to the aminoacid sequence of the β-amyloid peptide, particularly of β-amyloidpeptide Aβ₁₋₁₆, modified with a hydrophilic moiety such as, for example,polyethylene glycol (PEG), wherein said hydrophilic moiety is covalentlybound to each of the termini of the antigenic peptide through at leastone, particularly one or two amino acids such as, for example, lysine,glutamic acid and cysteine or any other suitable amino acid or aminoacid analogue capable of serving as a connecting device for coupling thehydrophilic moiety to the peptide fragment, as described herein below inthe immunization process. When a PEG is used as the hydrophilic moiety,the free PEG termini are covalently bound to phosphatidylethanolamine orany other compound suitable to function as the anchoring element, forexample, to embed the antigenic construct in the bilayer of a liposomeas described herein.

In particular, the CDR of non-human origin is obtained from a murinedonor antibody which exhibits the characteristic properties ofACI-01-Ab7C2 (also named “mC2” throughout the application) deposited 1Dec. 2005 with the “Deutsche Sammlung von Mikroorganismen undZellkulturen GmbH (DSMZ) in Braunschweig, Mascheroder Weg 1 B, 38124Branuschweig, under the provisions of the Budapest Treaty underaccession no DSM ACC2750).

In one embodiment of the invention, the CDR of non-human origin isobtained from murine donor antibody ACI-01-Ab7C2 (also named “mC2”throughout the application) deposited 1 Dec. 2005 with the “DeutscheSammlung von Mikroorganismen und Zellkulturen GmbH (DSMZ) inBraunschweig, Mascheroder Weg 1 B, 38124 Branuschweig, under theprovisions of the Budapest Treaty under accession no DSM ACC2750).

Also the use of lipid A as part of the immunization protocol may havecontributed to a shift in the epitopic region.

In a specific embodiment, the invention relates to a humanized antibodyor a fragment thereof comprising integrated into human- orprimate-derived framework regions at least one peptide with an aminoacid sequence selected from the group of sequences consisting of SEQ IDNO: 2 representing CDR2 and SEQ ID NO: 3 representing CDR3 of the HeavyChain Variable Region (HCVR) and SEQ ID NO: 4 representing CDR1 of theLight Chain Variable Region (LCVR).

In another embodiment, the invention relates to a humanized antibody ora fragment thereof, wherein said humanized antibody comprises integratedinto human- or primate-derived heavy chain framework regions at leastone peptide with an amino acid sequence selected from the group ofsequences consisting of SEQ ID NO: 2 representing CDR2 and SEQ ID NO: 3representing CDR3 of the Heavy Chain Variable Region (HCVR).

In still another embodiment, the invention relates to a humanizedantibody or a fragment thereof, wherein said humanized antibodycomprises integrated into human- or primate-derived light chainframework regions a peptide with an amino acid sequence of SEQ ID NO: 4representing CDR1 of the Light Chain Variable Region (LCVR).

In particular, the invention relates to a Light Chain Variable Region(LCVR) comprising integrated into human- or primate-derived frameworkregions at least one peptide with an amino acid sequence of SEQ ID NO: 4representing CDR1 of the Light Chain Variable Region (LCVR).

In another specific embodiment, the invention relates to a Heavy ChainVariable Region (HCVR) comprising integrated into human- orprimate-derived framework regions at least one peptide with an aminoacid sequence selected from the group of sequences consisting of SEQ IDNO: 2 representing CDR2 and SEQ ID NO: 3 representing CDR3 of the HeavyChain Variable Region (HCVR).

The invention further relates to a humanized antibody or a fragmentthereof, which comprises integrated into human- or primate-derivedframework regions at least two peptides, which peptides are differentand exhibit an amino acid sequence selected from the group of sequencesconsisting of SEQ ID NO:1 representing CDR1, SEQ ID NO: 2 representingCDR2 and SEQ ID NO: 3 representing CDR3 of the Heavy Chain VariableRegion (HCVR) and SEQ ID NO: 4 representing CDR1, SEQ ID NO: 5representing CDR2 and SEQ ID NO: 6 representing CDR3 of the Light ChainVariable Region (LCVR) wherein the same CDR cannot be present twice inthe antibody. In particular, if the at least two CDRs present are bothCDRs of the Light Chain Variable Region (LCVR), at least on of said CDRsmust be CDR1 represented by SEQ ID NO: 4.

Also comprised by the invention is a humanized antibody or a fragmentthereof comprising integrated into human- or primate-derived heavy chainframework regions at least two peptides with an amino acid sequenceselected from the group of sequences consisting of SEQ ID NO: 1representing CDR1, SEQ ID NO: 2 representing CDR2 and SEQ ID NO: 3representing CDR3 of the Heavy Chain Variable Region (HCVR), butparticularly a humanized antibody or a fragment thereof wherein the sameCDR cannot be present twice in the antibody.

In particular, the invention relates to a Heavy Chain Variable Region(HCVR) comprising integrated into human- or primate-derived heavy chainframework regions at least two peptides with an amino acid sequenceselected from the group of sequences consisting of SEQ ID NO: 1representing CDR1, SEQ ID NO: 2 representing CDR2 and SEQ ID NO: 3representing CDR3 of the Heavy Chain Variable Region (HCVR).

In a further embodiment, the invention relates to a humanized antibodyor a fragment thereof, comprising integrated into human- orprimate-derived light chain framework regions at least two peptides withan amino acid sequence selected from the group of sequences consistingof SEQ ID NO: 4 representing CDR1, SEQ ID NO: 5 representing CDR2 andSEQ ID NO: 6 representing CDR3 of the Light Chain Variable Region(LCVR).

In particular, the invention relates to a Light Chain Variable Region(LCVR), which has integrated into human- or primate-derived light chainframework regions at least two peptides with an amino acid sequenceselected from the group of sequences consisting of SEQ ID NO: 4representing CDR1, SEQ ID NO: 5 representing CDR2 and SEQ ID NO: 6representing CDR3 of the Light Chain Variable Region (LCVR), wherein thesame CDR cannot be present twice in the antibody and, in particular, atleast on of said CDRs must be CDR1 represented by SEQ ID NO: 4.

The invention also relates to a humanized antibody or a fragmentthereof, comprising integrated into human- or primate-derived heavychain framework regions peptides with an amino acid sequence of SEQ IDNO: 1 representing CDR1, SEQ ID NO: 2 representing CDR2 and SEQ ID NO: 3representing CDR3 of the Heavy Chain Variable Region (HCVR),particularly in the order indicated above.

In particular, the invention relates to a Heavy Chain Variable Region(HCVR) comprising integrated into human- or primate-derived heavy chainframework regions peptides with an amino acid sequence of SEQ ID NO: 1representing CDR1, SEQ ID NO: 2 representing CDR2 and SEQ ID NO: 3representing CDR3 of the Heavy Chain Variable Region (HCVR),particularly in the order indicated above.

Also comprised by the invention is a humanized antibody or a fragmentthereof comprising integrated into human- or primate-derived light chainframework regions peptides with an amino acid sequence of SEQ ID NO: 4representing CDR1, SEQ ID NO: 5 representing CDR2 and SEQ ID NO: 6representing CDR3 of the Light Chain Variable Region (LCVR),particularly in the order indicated above.

In particular, the invention relates to a Light Chain Variable Region(LCVR) comprising integrated into human- or primate-derived light chainframework regions peptides with an amino acid sequence of SEQ ID NO: 4representing CDR1, SEQ ID NO: 5 representing CDR2 and SEQ ID NO: 6representing CDR3 of the Light Chain Variable Region (LCVR),particularly in the order indicated above.

The invention also relates to a humanized antibody or a fragmentthereof, which comprises integrated into human- or primate-derivedframework regions at least three peptides with an amino acid sequenceselected from the group of sequences consisting of SEQ ID NO: 1representing CDR1, SEQ ID NO: 2 representing CDR2 and SEQ ID NO: 3representing CDR3 of the Heavy Chain Variable Region (HCVR) and SEQ IDNO: 4 representing CDR1, SEQ ID NO: 5 representing CDR2 and SEQ ID NO: 6representing. CDR3 of the Light Chain Variable Region (LCVR), butparticularly a humanized antibody or a fragment thereof wherein the sameCDR cannot be present twice in the antibody.

In another embodiment the invention relates to a humanized antibody or afragment thereof, which antibody comprises integrated into human- orprimate-derived framework regions at least four peptides with an aminoacid sequence selected from the group of sequences consisting of SEQ IDNO: 1 representing CDR1, SEQ ID NO: 2 representing CDR2 and SEQ ID NO:3representing CDR3 of the Heavy Chain Variable Region (HCVR) and SEQ IDNO: 4 representing CDR1, SEQ ID NO: 5 representing CDR2 and SEQ ID NO: 6representing CDR3 of the Light Chain Variable Region (LCVR), butparticularly a humanized antibody or a fragment thereof wherein the sameCDR cannot be present twice in the antibody.

In still another embodiment, the invention relates to a humanizedantibody or a fragment thereof, which comprises integrated into human-or primate-derived framework regions at least five peptides with anamino acid sequence selected from the group of sequences consisting ofSEQ ID NO: 1 representing CDR1, SEQ ID NO: 2 representing CDR2 and SEQID NO:3 representing CDR3 of the Heavy Chain Variable Region (HCVR) andSEQ ID NO: 4 representing CDR1, SEQ ID NO: 5 representing CDR2 and SEQID NO: 6 representing CDR3 of the Light Chain Variable Region (LCVR),but particularly a humanized antibody or a fragment thereof wherein thesame CDR cannot be present twice in the antibody.

In still another embodiment, the invention relates to a humanizedantibody or a fragment thereof, which comprises integrated into human-or primate-derived framework regions peptides with an amino acidsequence of SEQ ID NO: 1 representing CDR1, SEQ ID NO: 2 representingCDR2 and SEQ ID NO: 3 representing CDR3 of the Heavy Chain VariableRegion (HCVR) and SEQ ID NO: 4 representing CDR1, SEQ ID NO: 5representing CDR2 and SEQ ID NO: 6 representing CDR3 of the Light ChainVariable Region (LCVR).

In a specific embodiment, the invention relates to a humanized antibody,a Heavy Chain Variable Region (HCVR), or a fragment thereof, whereinsaid humanized antibody, Heavy Chain Variable Region (HCVR) or fragmentthereof comprises integrated into human- or primate-derived heavy chainframework regions at least a peptide with an amino acid sequence of SEQID NO: 2 representing CDR2 of the Heavy Chain Variable Region (HCVR).

In another specific embodiment, the invention relates to a humanizedantibody, a Heavy Chain Variable Region (HCVR) or a fragment thereof,wherein said humanized antibody, Heavy Chain Variable Region (HCVR) orfragment thereof comprises integrated into human- or primate-derivedheavy chain framework regions at least a peptide with an amino acidsequence of SEQ ID NO: 3 representing CDR3 of the Heavy Chain VariableRegion (HCVR).

In another specific embodiment, the invention relates to a humanizedantibody, Heavy Chain Variable Region (HCVR) or a fragment thereof,which antibody, Heavy Chain Variable Region (HCVR) or fragment thereofcomprises integrated into human- or primate-derived heavy chainframework regions at least two peptides with an amino acid sequence ofSEQ ID NO: 1 representing CDR1 and SEQ ID NO: 2 representing CDR2 of theHeavy Chain Variable Region (HCVR).

In another specific embodiment, the invention relates to a humanizedantibody, a Heavy Chain Variable Region (HCVR) or a fragment thereof,which antibody, Heavy Chain Variable Region (HCVR) or fragment thereofcomprises integrated into human- or primate-derived heavy chainframework regions at least two peptides with an amino acid sequence ofSEQ ID NO: 1 representing CDR1 and SEQ ID NO: 3 representing CDR3 of theHeavy Chain Variable Region (HCVR).

In another specific embodiment, the invention relates to a humanizedantibody, a Heavy Chain Variable Region (HCVR) or a fragment thereof,which antibody, Heavy Chain Variable Region (HCVR) or fragment thereofcomprises integrated into human- or primate-derived heavy chainframework regions at least two peptides with an amino acid sequence ofSEQ ID NO: 2 representing CDR2 and SEQ ID NO: 3 representing CDR3 of theHeavy Chain Variable Region (HCVR).

In another specific embodiment, the invention relates to a humanizedantibody, a Light Chain Variable Region (LCVR) or a fragment thereof,which antibody, Light Chain Variable Region (LCVR) or fragment thereofcomprises integrated into human- or primate-derived heavy chainframework regions at least two peptides with an amino acid sequence ofSEQ ID NO: 4 representing CDR1 and SEQ ID NO: 5 representing CDR2 of theLight Chain Variable Region (LCVR).

In another specific embodiment, the invention relates to a humanizedantibody, a Light Chain Variable Region (LCVR) or a fragment thereof,which antibody, Light Chain Variable Region (LCVR) or fragment thereofcomprises integrated into human- or primate-derived heavy chainframework regions at least two peptides with an amino acid sequence ofSEQ ID NO: 4 representing CDR1 and SEQ ID NO: 6 representing CDR3 of theLight Chain Variable Region (LCVR).

Further comprised by the invention is a humanized antibody or a fragmentthereof, wherein both the Heavy Chain Variable Region (HCVR) and theLight Chain Variable Region (LCVR) of the mouse C2 antibody eachcontributes at least one of its CDR regions to the at least two CDRregions of the humanized antibody. The resulting humanized antibody or afragment thereof thus may comprise

-   -   at least an amino acid sequence of SEQ ID NO: 1 representing        CDR1 (HCVR) in combination with an amino acid sequence of SEQ ID        NO: 4 representing CDR1 (LCVR);    -   at least an amino acid sequence of SEQ ID NO: 2 representing        CDR2 (HCVR) in combination with an amino acid sequence of SEQ ID        NO: 4 representing CDR1 (LCVR);    -   at least an amino acid sequence of SEQ ID NO: 3 representing        CDR3 (HCVR) in combination with an amino acid sequence of SEQ ID        NO: 4 representing CDR1 (LCVR);    -   at least an amino acid sequence of SEQ ID NO: 1 representing        CDR1 (HCVR) in combination with an amino acid sequence of SEQ ID        NO: 5 representing CDR2 (LCVR);    -   at least an amino acid sequence of SEQ ID NO: 2 representing        CDR2 (HCVR) in combination with an amino acid sequence of SEQ ID        NO: 5 representing CDR2 (LCVR);    -   at least an amino acid sequence of SEQ ID NO:2 representing CDR2        (HCVR) in combination with an amino acid sequence of SEQ ID NO:        6 representing CDR3 (LCVR);    -   at least an amino acid sequence of SEQ ID NO:1 representing CDR1        (HCVR) in combination with an amino acid sequence of SEQ ID NO:        6 representing CDR3 (LCVR);    -   at least an amino acid sequence of SEQ ID NO: 3 representing        CDR3 (HCVR) in combination with an amino acid sequence of SEQ ID        NO: 5 representing CDR2 (LCVR);    -   at least an amino acid sequence of SEQ ID NO: 3 representing        CDR3 (HCVR) in combination with an amino acid sequence of SEQ ID        NO: 6 representing CDR3 (LCVR).

In still another embodiment, the invention relates to a chimericantibody or a fragment thereof, or a humanized antibody or a fragmentthereof as described herein before, which antibody comprises a lightchain and/or a heavy chain constant region of human or primate origin.

In a further embodiment, the invention relates to a chimeric antibody ora fragment thereof, or a humanized antibody or a fragment thereof,wherein at least one, particularly at least one but not more than 5,more particularly at least one but not more than 4, even moreparticularly at least one but not more than 3, but especially at leastone but not more than 2, of the amino acids representative of the lightchain and/or heavy chain CDR regions as given in SEQ ID NOs: 1-6 ischanged through a conservative substitution such that the antibodymaintains its full functionality.

In particular, the invention relates to a chimeric antibody or afragment thereof, or a humanized antibody or a fragment thereof, whereinin CDR2 of the light chain variable region (LCVR) as given in SEQ ID NO:5, the Lys at Kabat position 50 is replaced by an amino acid residueselected from the group consisting of Arg, Gln and Glu, particularly byArg.

In particular, the invention relates to a light chain variable region(LCVR) wherein in CDR2 as given in SEQ ID NO: 5, the Lys at Kabatposition 50 is replaced by an amino acid residue selected from the groupconsisting of Arg, Gln and Glu, particularly by Arg.

In another embodiment, the invention relates to a chimeric antibody or afragment thereof, or a humanized antibody or a fragment thereof, whereinin CDR2 of the light chain variable region (LCVR) as given in SEQ ID NO:5, the Ser at Kabat position 53 is replaced by an amino acid residueselected from the group consisting of Asn or Thr, but particularly byAsn.

In particular, the invention relates to a light chain variable region(LCVR) wherein in CDR2 as given in SEQ ID NO: 5, the Ser at Kabatposition 53 is replaced by an amino acid residue selected from the groupconsisting of Asn or Thr, but particularly by Asn.

In one embodiment of the invention, a chimeric antibody or a fragmentthereof, or a humanized antibody or a fragment thereof is provided,wherein the Heavy Chain Variable Region (HCVR) has an amino acidsequence that is 90%, particularly 95%, more particularly 98% identicalto the sequence given in SEQ ID NO: 15 and 16, respectively.

In another embodiment of the invention, a chimeric antibody or afragment thereof, or a humanized antibody or a fragment thereof isprovided, wherein the Light Chain Variable Region (LCVR) has an aminoacid sequence that is 90%, particularly 95%, more particularly 98%identical to the sequence given in SEQ ID NO: 12 and 13, respectively.

In still another embodiment of the invention, a humanized antibody or afragment thereof is provided, wherein at least two, but especiallythree, of the CDR regions of the Heavy Chain Variable Region (HCVR) havean amino acid sequence that is 90%, particularly 95%, more particularly98% identical to the corresponding CDR region as given in SEQ ID NO:1-3.

In a further embodiment of the invention, a humanized antibody or afragment thereof is provided, wherein at least two, but especiallythree, of the CDR regions of the Light Chain Variable Region (LCVR) havean amino acid sequence that is 90%, particularly 95%, more particularly98% identical to the corresponding CDR region as given in SEQ ID NO:4-6.

In still another embodiment, the invention relates to a chimericantibody or a fragment thereof, or a humanized antibody or a fragmentthereof according to the present invention as described herein beforewherein the Heavy Chain Variable Region (HCVR) has an amino acidsequence that is 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99%identical to the sequence given in SEQ ID NO: 15 and 16, respectively.

In still another embodiment, the invention relates to a chimericantibody or a fragment thereof, or a humanized antibody or a fragmentthereof according to the present invention as described herein beforewherein the Light Chain Variable Region (LCVR) has an amino acidsequence that is 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99%identical to the sequence given in SEQ ID NO: 12 and 13, respectively.

In still another embodiment, the invention relates to a chimericantibody or a fragment thereof, or a humanized antibody or a fragmentthereof according to the present invention as described herein before,wherein at least one, particularly at least two, but especially three,of the CDR regions of the Heavy Chain Variable Region (HCVR) have anamino acid sequence that is 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%or 99% identical to the corresponding CDR region as given in SEQ ID NO:1-3.

In still another embodiment, the invention relates to a chimericantibody or a fragment thereof, or a humanized antibody or a fragmentthereof according to the present invention as described herein before,wherein at least one, particularly at least two, but especially three,of the CDR regions of the Light Chain Variable Region (LCVR) have anamino acid sequence that is 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%or 99% identical to the corresponding CDR region as given in SEQ ID NO:4-6.

In still another embodiment, the invention relates to a humanizedantibody according to the present invention and as described hereinbefore, wherein at least one of the amino acids representative of theacceptor framework sequences obtained from human germline V_(H) andV_(K) sequences, respectively is changed through a substitution to anamino acid from the corresponding region of murine antibody ACI-01-Ab7C2or a substitution conservative thereto.

In particular, the invention relates to a Heavy Chain Variable Regionand to a humanized antibody comprising this Heavy Chain Variable Region,respectively, wherein the Trp in Kabat position 47 in the acceptorframework sequence obtained from human germline V_(H) sequences of KABATsubgroup V_(H)III of the Heavy Chain Variable Region is replaced by anamino acid selected from the group consisting of Leu, norleucine, Ile,Val, Met, Ala, and Phe, particularly Leu and Ile, but especially Leusuch as shown in SEQ ID NO: 15.

The invention further relates to a Heavy Chain Variable Region and to ahumanized antibody comprising this Heavy Chain Variable Region,respectively, wherein the Arg in Kabat position 94 in the acceptorframework sequence obtained from human germline V_(H) sequences of KABATsubgroup V_(H)III of the Heavy Chain Variable Region is replaced by anamino acid selected from the group consisting of Ser and Thr, butespecially by Ser such as shown in SEQ ID NO: 15.

In still another embodiment, the invention relates to a Heavy ChainVariable Region and to a humanized antibody comprising this Heavy ChainVariable Region, respectively, wherein the Trp in Kabat position 47 inthe acceptor framework sequence obtained from human germline V_(H)sequences of KABAT subgroup V_(H)III of the Heavy Chain Variable Regionis replaced by an amino acid selected from the group consisting of Leu,norleucine, Ile, Val, Met, Ala, and Phe, particularly Leu and Ile, butespecially Leu and the Arg in Kabat position 94 is replaced by an aminoacid selected from the group consisting of Ser and Thr, but especiallyby Ser such as shown in SEQ ID NO: 15.

The invention further relates to a Light Chain Variable Region and to ahumanized antibody comprising this Light Chain Variable Region,respectively, wherein the Gln in Kabat position 45 in the acceptorframework sequence obtained from human germline V_(K) sequences of KABATsubgroup V_(K)II of the Light Chain Variable Region is replaced by anamino acid selected from the group consisting of Lys, Arg, Gln, and Asn,particularly by Lys and Arg, but especially by Lys.

The invention further relates to a Light Chain Variable Region and to ahumanized antibody comprising this Light Chain Variable Region,respectively, wherein the Tyr in Kabat position 87 in the acceptorframework sequence obtained from human germline V_(K) sequences of KABATsubgroup V_(K)II of the Light Chain Variable Region is replaced by anamino acid selected from the group consisting of Phe, Leu, Val, Ile, andAla, particularly by Leu and Phe, but especially by Phe.

The invention further relates to a Light Chain Variable Region and to ahumanized antibody comprising this Light Chain Variable Region,respectively, wherein the Lys in Kabat position 50 in the CDR2 regionobtained from a mouse monoclonal antibody, particularly murine antibodyACI-01-Ab7C2, such as shown in SEQ ID NO: 12 is replaced by an aminoacid selected from the group consisting of Arg, Gln, His, and Asn, butespecially by Arg

In still another embodiment, the invention relates to a Light ChainVariable Region and to a humanized antibody comprising this Light ChainVariable Region, respectively, wherein the Asn in Kabat position 53 inthe CDR2 region obtained from a mouse monoclonal antibody, particularlymurine antibody ACI-01-Ab7C2, such as shown in SEQ ID NO: 12 is replacedby an amino acid selected from the group consisting of Ala, Val, Leu,Ser and Ile; but especially Ser.

In still another embodiment, the invention relates to a humanizedantibody, wherein the Trp in Kabat position 47 in the acceptor frameworksequence obtained from human germline V_(H) sequences of KABAT subgroupV_(H)III of the Heavy Chain Variable Region is replaced by an amino acidselected from the group consisting of Leu, norleucine, Ile, Val, Met,Ala, and Phe, particularly Leu and Ile, but especially Leu and the Argin Kabat position 94 in the acceptor framework sequence obtained fromhuman germline V_(H) sequences of KABAT subgroup V_(H)III of the HeavyChain Variable Region is replaced by an amino acid selected from thegroup consisting of Ser and Thr, but especially by Ser as shown in SEQID NO: 15, and the Tyr in Kabat position 87 in the acceptor frameworksequence obtained from human germline V_(K) sequences of KABAT subgroupV_(K)II of the Light Chain Variable Region is replaced by an amino acidselected from the group consisting of Phe, Leu, Val, Ile, and Ala,particularly by Leu and Phe, but especially by Phe.

In still another embodiment, the invention relates to a Heavy ChainVariable Region and to a humanized antibody comprising this Heavy ChainVariable Region, respectively, wherein the Trp in Kabat position 47 inthe acceptor framework sequence obtained from human germline V_(H)sequences of KABAT subgroup V_(H)III of the Heavy Chain Variable Regionas shown in SEQ ID NO: 15 is replaced by Leu.

In still another embodiment, the invention relates to a Heavy ChainVariable Region and to a humanized antibody comprising this Heavy ChainVariable Region, respectively, wherein the Arg in Kabat position 94 inthe acceptor framework sequence obtained from human germline V_(H)sequences of KABAT subgroup V_(H)III of the Heavy Chain Variable Regionis replaced by Ser such as shown in SEQ ID NO: 15.

In still another embodiment, the invention relates to a Heavy ChainVariable Region and to a humanized antibody comprising this Heavy ChainVariable Region, respectively, wherein the Trp in Kabat position 47 inthe acceptor framework sequence obtained from human germline V_(H)sequences of KABAT subgroup V_(H)III of the Heavy Chain Variable Regionis replaced by Leu and Ile, but especially Leu and the Arg in Kabatposition 94 in the acceptor framework sequence obtained from humangermline V_(H) sequences of KABAT subgroup V_(H)III of the Heavy ChainVariable Region is replaced by Ser such as shown in SEQ ID NO: 15.

In still another embodiment, the invention relates to a Light ChainVariable Region and to a humanized antibody comprising this Heavy ChainVariable Region, respectively, wherein the Tyr in Kabat position 87 inthe acceptor framework sequence obtained from human germline V_(K)sequences of KABAT subgroup V_(K)II of the Light Chain Variable Regionis replaced by Phe.

In still another embodiment, the invention relates to a Heavy ChainVariable Region and to a humanized antibody comprising this Heavy ChainVariable Region, respectively, wherein the Trp in Kabat position 47 inthe acceptor framework sequence obtained from human germline V_(H)sequences of KABAT subgroup V_(H)III of the Heavy Chain Variable Regionis replaced by Leu and Ile, but especially Leu and the Arg in Kabatposition 94 in the acceptor framework sequence obtained from humangermline V_(H) sequences of KABAT subgroup V_(H)III of the Heavy ChainVariable Region is replaced by Ser such as shown in SEQ ID NO: 15 andthe Tyr in Kabat position 87 in the acceptor framework sequence obtainedfrom human germline V_(K) sequences of KABAT subgroup V_(K)II of theLight Chain Variable Region is replaced by Phe.

In one embodiment, the invention relates to a Heavy Chain VariableRegion and to a humanized antibody comprising this Heavy Chain VariableRegion, respectively, wherein the Trp in Kabat position 47 in theacceptor framework sequence obtained from human germline V_(H) sequencesof KABAT subgroup V_(H)III of the Heavy Chain Variable Region isreplaced by an amino acid selected from the group consisting of Leu,norleucine, Ile, Val, Met, Ala, and Phe, particularly Leu and Ile, butespecially Leu and the Arg in Kabat position 94 is replaced by an aminoacid selected from the group consisting of Ser and Thr, but especiallyby Ser such as shown in SEQ ID NO: 15 and wherein the Lys in Kabatposition 50 in the CDR2 region obtained from a mouse monoclonalantibody, particularly murine antibody ACI-01-Ab7C2, is replaced by anamino acid selected from the group consisting of Arg, Gln, His, and Asn,but especially by Arg.

In one embodiment, the invention relates to a Heavy Chain VariableRegion and to a humanized antibody comprising this Heavy Chain VariableRegion, respectively, wherein the Trp in Kabat position 47 in theacceptor framework sequence obtained from human germline V_(H) sequencesof KABAT subgroup V_(H)III of the Heavy Chain Variable Region isreplaced by an amino acid selected from the group consisting of Leu,norleucine, Ile, Val, Met, Ala, and Phe, particularly Leu and Ile, butespecially Leu and the Arg in Kabat position 94 is replaced by an aminoacid selected from the group consisting of Ser and Thr, but especiallyby Ser such as shown in SEQ ID NO: 15 and wherein the Asn in Kabatposition 53 in the CDR2 region obtained from a mouse monoclonalantibody, particularly murine antibody ACI-01-Ab7C2, is replaced by anamino acid selected from the group consisting of Ala, Val, Leu, Ser andIle; but especially Ser.

In a specific embodiment, the invention relates to the light chainvariable region of SEQ ID NO: 12.

In another specific embodiment of the invention, a humanized antibody isprovided, which comprises the light chain variable region of SEQ ID NO:12.

In a specific embodiment, the invention relates to the light chainvariable region including signal sequences as shown in SEQ ID NO: 13.

In another specific embodiment of the invention, a humanized antibody isprovided, which comprises the complete light chain variable regionincluding signal sequences as shown in SEQ ID NO: 13.

In another specific embodiment of the invention, a humanized antibody isprovided, which comprises the light chain variable region of SEQ ID NO:12 and the light chain constant region of SEQ ID NO: 14.

In another specific embodiment of the invention, a humanized antibody isprovided, which comprises the complete light chain variable region ofSEQ ID NO: 13 and the light chain constant region of SEQ ID NO: 14.

In a specific embodiment, the invention relates to the heavy chainvariable region of SEQ ID NO: 15.

In another specific embodiment of the invention, a humanized antibody isprovided, which comprises the heavy chain variable region of SEQ ID NO:15.

In a specific embodiment, the invention relates to the heavy chainvariable region including signal sequences as shown in SEQ ID NO: 16.

In another specific embodiment of the invention, a humanized antibody isprovided, which comprises the complete heavy chain variable regionincluding signal sequences as shown in SEQ ID NO: 16.

In another specific embodiment of the invention, a humanized antibody isprovided, which comprises the heavy chain variable region of SEQ ID NO:15 and the heavy chain constant region of SEQ ID NO: 17.

In another specific embodiment of the invention, a humanized antibody isprovided, which comprises the heavy chain variable region of SEQ ID NO:16 and the heavy chain constant region of SEQ ID NO: 17.

In one embodiment the humanized antibody according to the invention andas described herein, upon co-incubation with an Aβ monomeric peptidehaving at least 30, particularly at least 35, more particularly at least38, even more particularly at least 40 amino acid residues and/or an Aβpolymeric soluble amyloid peptide comprising a plurality of said Aβmonomeric units, but especially with an Aβ₁₋₄₂ monomeric and/or an Aβpolymeric soluble amyloid peptide comprising a plurality of said Aβ₁₋₄₂monomeric units, particularly at a molar concentration ratio of antibodyto Aβ1-42 of up to 1:1000, particularly of up to 1:500, moreparticularly of up to 1:300, even more particularly of up to 1:200, butespecially at a molar concentration ratio of between 1:10 and 1:100,inhibits the aggregation of the Aβ monomers to high molecular polymericfibrils.

In particular, the co-incubation of the antibody according to theinvention with amyloid monomeric and/or polymeric soluble amyloidpeptides is carried out for 24 hours to 60 hours, particularly for 30hours to 50 hours, more particularly for 48 hours, but especially 24hours, at a temperature of between 28° C. and 40° C., particularly ofbetween 32° C. and 38° C., more particularly at 37° C.

In a specific embodiment of the invention, co-incubation with amyloidmonomeric and/or polymeric soluble amyloid peptides is accomplished for24 hours at a temperature of 37° C.

In particular, the antibody, particularly the humanized antibodyaccording to the invention including any functionally equivalentantibody or functional parts thereof binds to Aβ₁₋₄₂ monomeric peptideand/or Aβ polymeric soluble amyloid peptide comprising a plurality ofsaid Aβ₁₋₄₂ monomeric units and, upon co-incubation with Aβ₁₋₄₂monomeric peptide and/or Aβ polymeric soluble amyloid peptide comprisinga plurality of said Aβ₁₋₄₂ monomeric units inhibits the aggregation ofthe Aβ monomers and/or polymers to high molecular polymeric fibrils.

In one embodiment, the antibody, particularly the humanized antibodyaccording to the invention including any functionally equivalentantibody or functional parts thereof inhibits the aggregation of the Aβmonomers and/or Aβ soluble polymers comprising a plurality of said Aβmonomeric units to high molecular polymeric fibrils by at least 50%,particularly by at least 60%, particularly by at least 65%, moreparticularly by at least 75%, even more particularly by at least 80%,but especially by at least 85%-90%, or more as compared to therespective amyloid peptide monomers incubated in buffer (control), at amolar concentration ratio of antibody to Aβ1-42 of up to 1:1000,particularly at a molar concentration ratio of between 1:10 and 1:100,but especially at a molar concentration ratio of 1:10.

In a specific embodiment of the invention, the antibody, particularlythe humanized antibody according to the invention including anyfunctionally equivalent antibody or functional parts thereof inhibitsthe aggregation of the Aβ monomers and/or Aβ soluble polymers comprisinga plurality of said Aβ monomeric units to high molecular polymericfibrils by at least 30% at a molar concentration ratio of antibody toAβ1-42 of 1:100.

In another specific embodiment of the invention, the antibody,particularly the humanized antibody according to the invention includingany functionally equivalent antibody or functional parts thereofinhibits the aggregation of the Aβ monomers and/or Aβ soluble polymerscomprising a plurality of said Aβ monomeric units to high molecularpolymeric fibrils by at least 80% at a molar concentration ratio ofantibody to Aβ1-42 of 1:10.

Binding of the antibodies according to the invention and as describedherein to amyloidogenic monomeric and/or polymeric peptides but,particularly, to the amyloid form (1-42) leads to inhibition of theaggregation of monomeric and/or polymeric amyloidogenic peptides to highmolecular fibrils or filaments. Through the inhibition of theaggregation of amyloidogenic monomeric and/or polymeric peptides theantibodies according to the present invention are capable of preventingor slowing down the formation of amyloid plaques, particularly theamyloid form (1-42), which is know to become insoluble by change ofsecondary conformation and to be the major part of amyloid plaques inbrains of diseased animals or humans.

The aggregation inhibition potential of the antibody according to theinvention may be determined by any suitable method known in the art,particularly by density-gradient ultracentrifugation followed by aSDS-PAGE sedimentation analysis on a preformed gradient and/or by athioflavin T (Th-T) fluorescent assay.

In one embodiment, the invention relates to an antibody, particularly ahumanized antibody as described herein including any functionallyequivalent antibody or functional parts thereof, which antibody, uponco-incubation, particularly at a molar concentration ratio of between1:5 and 1:1000, particularly of between 1:10 and 1:500, moreparticularly at a ratio of 1:10 to 1:300, even more particularly at aratio of between 1:10 and 1:100, with preformed high molecular polymericamyloid fibrils or filaments formed by the aggregation of Aβ monomericpeptides having at least 30, particularly at least 35, more particularlyat least 38, even more particularly at least 40 amino acid residues and,but especially Aβ₁₋₄₂ monomeric peptides, is capable of disaggregatingthe preformed polymeric fibrils or filaments by at least 20%,particularly by at least 30%, more particularly by at least 35%%, evenmore particularly by at least 40%, but especially by at least 50% ormore.

In a specific embodiment of the invention, the aggregation inhibitionand the disaggregation potential of the antibody, respectively, isdetermined by density-gradient ultracentrifugation followed by aSDS-PAGE sedimentation analysis on a preformed gradient.

In another specific embodiment of the invention, the aggregationinhibition and the disaggregation potential of the antibody,respectively, is determined by thioflavin T (Th-T) fluorescent assay.

In another specific embodiment, the antibody according to the inventionis co-incubated with amyloid preformed high molecular polymeric amyloidfibrils or filaments for 12 hours to 36 hours, particularly for 18 hoursto 30 hours, more particularly for 24 hours at a temperature of between28° C. and 40° C., particularly of between 32° C. and 38° C., moreparticularly at 37° C.

In particular, the co-incubation with preformed high molecular polymericamyloid fibrils or filaments is done for 24 hours at a temperature of37° C.

In a specific embodiment of the invention, the antibody, particularlythe humanized antibody according to the invention including anyfunctionally equivalent antibody or functional parts thereof is capableof disaggregating the preformed polymeric fibrils or filaments by atleast 24% at a molar concentration ratio of antibody to Aβ1-42 of 1:100.

In another specific embodiment of the invention, the antibody,particularly the humanized antibody according to the invention includingany functionally equivalent antibody or functional parts thereof iscapable of disaggregating the preformed polymeric fibrils or filamentsby at least 32% at a molar concentration ratio of antibody to Aβ1-42 of1:10.

Through the disaggregation of amyloidogenic polymeric fibrils orfilaments the antibodies according to the present invention are capableof preventing or slowing down the formation of amyloid plaques whichleads to an alleviation of the symptoms associated with the disease anda delay or reversal of its progression.

Accordingly, it is a further embodiment of the invention to provide anantibody, particularly a humanized antibody, including any functionallyequivalent antibody or functional parts thereof as described herein,which antibody is capable of decreasing the total amount of Aβ in thebrain of an animal, particularly a mammal, but especially a humansuffering from a disease or condition leading to increased concentrationof Aβ in the brain.

In another embodiment, the invention relates to a humanized antibodyaccording to the invention and as described herein before, whichantibody is bi-effective in that it exhibits both an aggregationinhibition property as well as a disaggregation property, particularlypaired with a high degree of conformational sensitivity.

In particular, the invention relates to a chimeric antibody or afragment thereof, or a humanized antibody or a fragment thereofaccording to the invention and as described herein before, whichantibody, upon co-incubation with amyloid monomeric and/or polymericsoluble amyloid peptides, particularly with β-amyloid monomeric peptidessuch as, for example, Aβ monomeric peptides 1-39; 1-40, 1-41, or 1-42,and/or a polymeric soluble β-amyloid peptide comprising a plurality ofsaid Aβ monomeric units, but especially with an Aβ₁₋₄₂ monomeric and/oran Aβ polymeric soluble amyloid peptide comprising a plurality of saidAβ₁₋₄₂ monomeric units, inhibits the aggregation of the Aβ monomers intohigh molecular polymeric fibrils or filaments and, in addition, uponco-incubation with preformed high molecular polymeric amyloid fibrils orfilaments formed by the aggregation of amyloid monomeric peptides,particularly β-amyloid monomeric peptides such as, for example, Aβmonomeric peptides 1-39; 1-40, 1-41, or 1-42, but especially Aβ₁₋₄₂monomeric peptides, is capable of disaggregating the preformed polymericfibrils or filaments.

In another aspect, the invention relates to a chimeric antibody or afragment thereof, or a humanized antibody or a fragment thereofaccording to the present invention and as described herein before, whichantibody is capable of inducing a transition of the β-sheet conformationtowards an α-helix and/or a random coil conformation, but particularly arandom coil conformation, even more particularly a random coilconformation at a given location in the molecule, especially in theenvironment of Tyr 10 and Val12 of the Aβ protein, which leads to anincrease of the random coil conformation at the expense of the β-sheetconformation and an improved solubilization of the preformed highmolecular polymeric amyloid fibrils or filaments. In particular thedecrease of the O-sheet conformation amounts to at least 30%,particularly to at least 35%, and more particularly to at least 40% andmore as compared to the respective preformed amyloid polymeric fibrilsor filaments incubated in buffer (control).

The antibody's potential in inducing a transition in the secondarystructure is determined by solid state 13C NMR spectroscopy but, inparticular, by measuring the integral intensities of the conformationsof Tyr 10 and Val 12 Cβ in the Aβ₁₋₄₂ peptide.

In a further embodiment of the invention, a chimeric antibody or afragment thereof, or a humanized antibody or a fragment thereofaccording to the present invention and as described herein before, isprovided comprising at least one light chain or a fragment thereof or atleast one heavy chain or a fragment thereof, wherein said antibody orfragment binds to an Aβ monomer with a high binding affinity with aK_(D) in a range of between at least about 1×10⁻⁷ M to at least about1×10⁻¹² M, particularly of at least about 1×10⁻⁸ M to at least about1×10⁻¹¹ M, more particularly of at least about 1×10⁻⁹ M to at leastabout 1×10⁻¹⁰ M, even more particularly of at least about 1×10⁻⁸ M to atleast about 2×10⁻⁸ M but, preferably, does not show any significantcross-reactivity with amyloid precursor protein (APP).

In another embodiment of the invention, a chimeric antibody or afragment thereof, or a humanized antibody or a fragment thereofaccording to the present invention and as described herein before, isprovided comprising at least one light chain or a fragment thereof or atleast one heavy chain or a fragment thereof, wherein said antibody orfragment binds to an Aβ fiber, fibril or filament with a high bindingaffinity with a K_(D) in a range of between at least about 1×10⁻⁷ M toat least about 1×10⁻¹² M, particularly of at least about 1×10⁻⁸ M to atleast about 1×10⁻¹¹ M, more particularly of at least about 1×10⁻⁹ M toat least about 1×10⁻¹⁰ M, even more particularly of at least about2×10⁻⁹ M to at least about 5×10⁻⁹ M, but, preferably, does not show anysignificant cross-reactivity with amyloid precursor protein (APP).

In another embodiment, the antibody according to the invention and asdescribed herein before or a fragment thereof, exhibits an bindingaffinity to an Aβ fiber, fibril or filament which is at least 2 times,particularly at least 4 times, particularly at least 10 times,particularly at least 15 times, more particularly at least 20 times, butespecially at least 25 times higher than the binding affinity to an Aβmonomer.

In still another embodiment, a chimeric antibody or a fragment thereof,or a humanized antibody or a fragment thereof is provided as describedherein before, which antibody substantially binds to aggregated Aβ,including Aβ plaques, in the mammalian, particularly the human brainbut, preferably, does not show any significant cross-reactivity withamyloid precursor protein (APP).

In another aspect of the invention, the chimeric antibody or a fragmentthereof, or a humanized antibody or a fragment thereof is provided asdescribed herein before, which antibody substantially binds to solublepolymeric amyloid, particularly amyloid β (Aβ), including Aβ monomers,in the mammalian, particularly the human brain but, preferably, does notshow any significant cross-reactivity with amyloid precursor protein(APP).

Further provided is a chimeric antibody or a fragment thereof, or ahumanized antibody or a fragment thereof according to the invention andas described herein before, which antibody significantly reduces Aβplaque burden in the mammalian, particularly the human brain. This canbe achieved by either binding of the antibody to the plaque or byshifting the equilibrium between amyloid, particularly amyloid β (Aβ),in its insoluble and aggregated state towards its soluble form bydisaggregating fibers to soluble poly- and monomeric forms by inducing ashift in conformation and binding and stabilizing the disaggregated andsolubilized amyloid forms, particularly amyloid β (Aβ) forms, in thetissue and/or body fluids, particularly the brain. Through the activityof the antibody according to the invention the peripheral clearing andcatabolism is thus favored rather than deposition within the tissueand/or body fluids, particularly the brain. The beneficial effect of theantibody according to the invention can thus be obtained without bindingof the antibody to the plaque.

Through this stabilizing activity, the antibody according to theinvention is able to neutralize the toxic effects of the polymeric andless aggregated soluble amyloid protein, particularly amyloid β (Aβ)protein, in the tissue and/or body fluids. In a specific embodiment ofthe invention the antibody according to the invention may thus achieveits beneficial effects without necessarily binding aggregated amyloidbeta in the brain.

In a further aspect of the invention a humanized antibody or a fragmentthereof according to the present invention and as described hereinbefore, is provided comprising at least one light chain or a fragmentthereof or at least one heavy chain or a fragment thereof incorporatingat least one, particularly two and more particularly three CDR regionsobtained form a mouse donor antibody, particularly from mouse antibodyACI-01-Ab7C2 (named “mC2” and hC2 for the humanized C2 antibody,throughout the application) deposited 1 Dec. 2005 with the “DeutscheSammlung von Mikroorganismen and Zellkulturen GmbH (DSMZ) inBraunschweig, Mascheroder Weg 1 B, 38124 Braunschweig, under accessionno DSM ACC2750, wherein said antibody or fragment thereof has anaffinity to the Aβ antigen which is at least 5 times, particularly atleast 8 times, more particularly at least 10 times, but especially atleast 15 times higher than that of the mouse donor antibody.

The antibody of this invention can be, in one embodiment, a wholeantibody (e.g., with two full length light chains and two full lengthheavy chains) of any isotype and subtype (e.g., IgM, IgD, IgG1, IgG2,IgG3, IgG4, IgE, IgA1 and IgA2); but especially an antibody of the IgG4isotype; alternatively, in another embodiment, it can be anantigen-binding fragment (e.g., Fab, F(ab′)₂, and Fv) of a wholeantibody.

The invention thus also relates to antigen-binding fragments of theantibodies described herein. In one embodiment of the invention, thefragment is selected from the group consisting of a Fab fragment, a Fab′fragment, a F(ab)₂ fragment, and a F_(v) fragment, including theproducts of an Fab immunoglobulin expression library and epitope-bindingfragments of any of the antibodies and fragments mentioned above.

In another embodiment, the antibody or antigen-binding fragment of theinvention is conjugated to polyethylene glycol. In yet anotherembodiment, the constant region of the antibody of the invention ismodified to reduce at least one constant region-mediated biologicaleffector function relative to an unmodified antibody. In still anotherembodiment, the antibody or antigen-binding fragment of the inventioncomprises a Fc region having an altered effector function.

The invention further relates to a nucleotide molecule comprising anucleotide sequence encoding a chimeric antibody or a fragment thereof,or a humanized antibody or a fragment thereof according to the inventionand as disclosed herein before.

In particular, the invention relates to a nucleotide molecule comprisinga nucleotide sequence encoding a stretch of contiguous amino acidmolecules as given in SEQ ID NO: 2 and 3, respectively, or thecomplementary sequence, representing the Complementarity DeterminingRegions (CDRs) 2 and 3 of the Heavy Chain Variable Region (HCVR).

More particularly, the invention relates to a nucleotide moleculecomprising a nucleotide sequence encoding a stretch of contiguous aminoacid molecules as given in SEQ ID NO: 4, or the complementary sequence,representing the Complementarity Determining Regions (CDRs) 1 of theLight Chain Variable Region (LCVR).

In another embodiment of the invention a nucleotide molecule is providedcomprising a nucleotide sequence as given in SEQ ID NO: 18 and SEQ IDNO: 19, or the complementary sequence, encoding the amino acid sequenceof CDR 2 and CDR 3, respectively, of the Heavy Chain Variable Region(HCVR).

In another embodiment of the invention a nucleotide molecule is providedcomprising a nucleotide sequence as given in SEQ ID NO: 20, or thecomplementary sequence, encoding the nucleotide sequence of CDR 1 of theLight Chain Variable Region (LCVR).

In another embodiment of the invention a nucleotide molecule is providedcomprising a nucleotide sequence of SEQ ID NO: 21, or the complementarysequence, encoding the light chain variable region.

In another embodiment of the invention a nucleotide molecule is providedcomprising a nucleotide sequence of SEQ ID NO: 22, or the complementarysequence, encoding the complete light chain variable region includingsignal sequences.

In another embodiment of the invention a nucleotide molecule is providedcomprising a nucleotide sequence encoding the light chain variableregion of SEQ ID NO: 22 and the light chain constant region of SEQ IDNO: 23. The invention also comprises the complementary strand of saidnucleotide molecule.

In another embodiment of the invention a nucleotide molecule is providedcomprising a nucleotide sequence of SEQ ID NO: 24 encoding the heavychain variable region. The invention also comprises the complementarystrand of said nucleotide molecule.

In another embodiment of the invention a nucleotide molecule is providedcomprising a nucleotide sequence of SEQ ID NO: 25 encoding the completeheavy chain variable region including signal sequences. The inventionalso comprises the complementary strand of said nucleotide molecule.

In another embodiment of the invention a nucleotide molecule is providedcomprising a nucleotide sequence encoding the heavy chain variableregion of SEQ ID NO: 25 and the heavy chain constant region of SEQ IDNO: 26. The invention also comprises the complementary strand of saidnucleotide molecule.

Also comprised by the present invention is a nucleotide sequence whichhybridizes to one of the above-described antibody-encoding nucleotidesequences of the invention, particularly to the complementary strandthereof, either in isolation or as part of larger nucleotide molecule.

In particular, the invention relates to a nucleotide sequence thathybridizes under conventional hybridization conditions, particularlyunder stringent hybridization conditions, to any of the nucleotidesequences given in SEQ ID NOs: 18-26 and 29-32, particularly to thecomplementary strand thereof.

In another embodiment of the invention an expression vector is providedcomprising the nucleic acid molecule according to the invention and asmentioned herein before.

In another embodiment of the invention a cell is provided comprising anexpression vector comprising the nucleic acid according to the inventionand as mentioned herein before.

In still another embodiment, the invention relates to a compositioncomprising the antibody according to the invention, but particularly achimeric antibody or a fragment thereof, or a humanized antibody or afragment thereof according to the invention and as described hereinbefore including any functionally equivalent antibody or any derivativeor functional parts thereof, in a therapeutically effective amount, inparticular a composition which is a pharmaceutical compositionoptionally further comprising a pharmaceutically acceptable carrier. Inanother embodiment of the invention, said composition comprises theantibody in a therapeutically effective amount.

Further comprised by the invention is a mixture comprising an antibody,particularly a monoclonal antibody according to the invention, butparticularly a chimeric antibody or a fragment thereof, or a humanizedantibody or a fragment thereof according to the invention and asdescribed herein before including any functionally equivalent antibodyor any derivative or functional parts thereof, in a therapeuticallyeffective amount and, optionally, a further biologically activesubstance and/or a pharmaceutically acceptable carrier and/or a diluentand/or an excipient.

In particular, the invention relates to a mixture, wherein the furtherbiologically active substance is a compound used in the medication ofamyloidosis, a group of diseases and disorders associated with amyloidor amyloid-like protein such as the Aβ protein involved in Alzheimer'sdisease.

In another embodiment of the invention, the other biologically activesubstance or compound may also be a therapeutic agent that may be usedin the treatment of amyloidosis caused by amyloid β or may be used inthe medication of other neurological disorders.

The other biologically active substance or compound may exert itsbiological effect by the same or a similar mechanism as the antibodyaccording to the invention or by an unrelated mechanism of action or bya multiplicity of related and/or unrelated mechanisms of action.

Generally, the other biologically active compound may includeneutron-transmission enhancers, psychotherapeutic drugs, acetylcholineesterase inhibitors, calcium-channel blockers, biogenic amines,benzodiazepine tranquilizers, acetylcholine synthesis, storage orrelease enhancers, acetylcholine postsynaptic receptor agonists,monoamine oxidase-A or -B inhibitors, N-methyl-D-aspartate glutamatereceptor antagonists, non-steroidal anti-inflammatory drugs,antioxidants, and serotonergic receptor antagonists.

More particularly, the invention relates to a mixture comprising atleast one compound selected from the group consisting of compoundseffective against oxidative stress, anti-apoptotic compounds, metalchelators, inhibitors of DNA repair such as pirenzepin and metabolites,3-amino-1-propanesulfonic acid (3APS), 1,3-propanedisulfonate (1,3PDS),α-secretase activators, β- and γ-secretase inhibitors, tau proteins,neurotransmitter, O-sheet breakers, attractants for amyloid betaclearing/depleting cellular components, inhibitors of N-terminaltruncated amyloid beta including pyroglutamated amyloid beta 3-42,anti-inflammatory molecules, or cholinesterase inhibitors (ChEIs) suchas tacrine, rivastigmine, donepezil, and/or galantamine, M1 agonists andother drugs including any amyloid or tau modifying drug and nutritivesupplements, and nutritive supplements, together with an antibodyaccording to the present invention and, optionally, a pharmaceuticallyacceptable carrier and/or a diluent and/or an excipient.

The invention further relates to a mixture, wherein the compound is acholinesterase inhibitor (ChEIs), particularly a mixture, wherein thecompound is one selected from the group consisting of tacrine,rivastigmine, donepezil, galantamine, niacin and memantine.

In a further embodiment, the mixtures according to the invention maycomprise niacin or memantine together with an antibody according to thepresent invention and, optionally, a pharmaceutically acceptable carrierand/or a diluent and/or an excipient.

In still another embodiment of the invention mixtures are provided thatcomprise “atypical antipsychotics” such as, for example clozapine,ziprasidone, risperidone, aripiprazole or olanzapine for the treatmentof positive and negative psychotic symptoms including hallucinations,delusions, thought disorders (manifested by marked incoherence,derailment, tangentiality), and bizarre or disorganized behavior, aswell as anhedonia, flattened affect, apathy, and social withdrawal,together with an antibody, particularly a monoclonal antibody accordingto the invention, but particularly a chimeric antibody or a fragmentthereof, or a humanized antibody or a fragment thereof according to theinvention and as described herein and, optionally, a pharmaceuticallyacceptable carrier and/or a diluent and/or an excipient.

In a specific embodiment of the invention, the compositions and mixturesaccording to the invention and as described herein before comprise theantibody and the biologically active substance, respectively, in atherapeutically effective amount.

Other compounds that can be suitably used in mixtures in combinationwith the antibody according to the present invention are described in WO2004/058258 (see especially pages 16 and 17) including therapeutic drugtargets (page 36-39), alkanesulfonic acids and alkanolsulfuric acids(pages 39-51), cholinesterase inhibitors (pages 51-56), NMDA receptorantagonists (pages 56-58), estrogens (pages 58-59), non-steroidalanti-inflammatory drugs (pages 60-61), antioxidants (pages 61-62),peroxisome proliferators-activated receptor (PPAR) agonists (pages63-67), cholesterol-lowering agents (pages 68-75); amyloid inhibitors(pages 75-77), amyloid formation inhibitors (pages 77-78), metalchelators (pages 78-79), anti-psychotics and anti-depressants (pages80-82), nutritional supplements (pages 83-89) and compounds increasingthe availability of biologically active substances in the brain (seepages 89-93) and prodrugs (pages 93 and 94), which document isincorporated herein by reference.

In another embodiment, the invention relates to a mixture comprising theantibody, particularly a monoclonal antibody according to the invention,but particularly a chimeric antibody or a fragment thereof, or ahumanized antibody or a fragment thereof according to the invention andas described herein before and/or the biologically active substance in atherapeutically effective amount.

The invention further relates to the use of an antibody, particularly amonoclonal antibody according to the invention, but particularly achimeric antibody or a fragment thereof, or a humanized antibody or afragment thereof according to the invention and as described hereinbefore and/or a functional part thereof and/or a pharmaceuticalcomposition, or a mixture comprising said antibody, for the preparationof a medicament for treating or alleviating the effects of amyloidosis,a group of diseases and disorders associated with amyloid plaqueformation including secondary amyloidosis and age-related amyloidosissuch as diseases including, but not limited to, neurological disorderssuch as Alzheimer's Disease (AD), Lewy body dementia, Down's syndrome,hereditary cerebral hemorrhage with amyloidosis (Dutch type); the GuamParkinson-Dementia complex; as well as other diseases which are based onor associated with amyloid-like proteins such as progressivesupranuclear palsy, multiple sclerosis; Creutzfeld Jacob disease,Parkinson's disease, HIV-related dementia, ALS (amyotropic lateralsclerosis), Adult Onset Diabetes; senile cardiac amyloidosis; endocrinetumors, and others, including macular degeneration.

Also comprised by the present invention is a method for the preparationof an antibody, particularly a monoclonal antibody according to theinvention, but particularly a chimeric antibody or a fragment thereof,or a humanized antibody or a fragment thereof according to the inventionand as described herein before and/or a functional part thereof and/or apharmaceutical composition, or a mixture comprising said antibody and/ora functional part, thereof, particularly in a therapeutically effectiveamount, for use in a method of preventing, treating or alleviating theeffects of amyloidosis, a group of diseases and disorders associatedwith amyloid plaque formation including secondary amyloidosis andage-related amyloidosis such as diseases including, but not limited to,neurological disorders such as Alzheimer's Disease (AD), Lewy bodydementia, Down's syndrome, hereditary cerebral hemorrhage withamyloidosis (Dutch type); the Guam Parkinson-Dementia complex; as wellas other diseases which are based on or associated with amyloid-likeproteins such as progressive supranuclear palsy, multiple sclerosis;Creutzfeld Jacob disease, Parkinson's disease, HIV-related dementia, ALS(amyotropic lateral sclerosis), Adult Onset Diabetes; senile cardiacamyloidosis; endocrine tumors, and others, including maculardegeneration comprising formulating an antibody, particularly amonoclonal antibody according to the invention, but particularly achimeric antibody or a fragment thereof, or a humanized antibody or afragment thereof according to the invention in a pharmaceuticallyacceptable form.

Further comprised by the present invention is a method for preventing,treating or alleviating the effects of amyloidosis, a group of diseasesand disorders associated with amyloid plaque formation includingsecondary amyloidosis and age-related amyloidosis such as diseasesincluding, but not limited to, neurological disorders such asAlzheimer's Disease (AD), Lewy body dementia, Down's syndrome,hereditary cerebral hemorrhage with amyloidosis (Dutch type); the GuamParkinson-Dementia complex; as well as other diseases which are based onor associated with amyloid-like proteins such as progressivesupranuclear palsy, multiple sclerosis; Creutzfeld Jacob disease,Parkinson's disease, HIV-related dementia, ALS (amyotropic lateralsclerosis), Adult Onset Diabetes; senile cardiac amyloidosis; endocrinetumors, and others, including macular degeneration by administering anantibody and/or a functional part thereof, but particularly a humanizedantibody and/or a functional part thereof, or a composition or mixturecomprising such an antibody and/or a functional part thereof, to a ananimal or a human affected by such a disorder comprising administeringthe antibody in a therapeutically effective amount.

It is also an object of the invention to provide a method for thetreatment of amyloidosis, a group of diseases and disorders associatedwith amyloid plaque formation including secondary amyloidosis andage-related amyloidosis including, but not limited to, neurologicaldisorders such as Alzheimer's Disease (AD), particularly a disease orcondition characterized by a loss of cognitive memory capacity byadministering to an animal, particularly a mammal or a human, anantibody, particularly a pharmaceutical composition according to theinvention and as described herein.

In a specific embodiment the invention provides a method for retainingor increasing cognitive memory capacity but, particularly, for restoringthe cognitive memory capacity of an animal, particularly a mammal or ahuman, suffering from memory impairment by administering to an animal,particularly a mammal or a human, an antibody, particularly apharmaceutical composition according to the invention and as describedherein before.

It is a further object of the invention to provide a therapeuticcomposition and a method of producing such a composition as well as amethod for the treatment of amyloidosis, a group of diseases anddisorders associated with amyloid plaque formation including secondaryamyloidosis and age-related amyloidosis including, but not limited to,neurological disorders such as Alzheimer's Disease (AD), particularly adisease or condition characterized by a loss of cognitive memorycapacity, using an antibody according to the invention and as describedherein before.

In particular, the invention relates to the treatment of an animal,particularly a mammal or a human, suffering from an amyloid-associatedcondition characterized by a loss of cognitive memory capacity leads tothe retention of cognitive memory capacity.

The invention further relates to a method of diagnosis of anamyloid-associated disease or condition in a patient comprisingdetecting the immunospecific binding of an antibody or an activefragment thereof to an epitope of the amyloid protein in a sample or insitu which includes the steps of

-   -   (a) bringing the sample or a specific body part or body area        suspected to contain the amyloid protein into contact with an        antibody, particularly a monoclonal antibody according to the        invention, but particularly a chimeric antibody or a fragment        thereof, or a humanized antibody or a fragment thereof according        to the invention and as described herein before, and/or a        functional part thereof, which antibody binds an epitope of the        amyloid protein;    -   (b) allowing the antibody and/or a functional part thereof, to        bind to the amyloid protein to form an immunological complex;    -   (c) detecting the formation of the immunological complex; and    -   (d) correlating the presence or absence of the immunological        complex with the presence or absence of amyloid protein in the        sample or specific body part or area.

Also comprised is a method of determining the extent of amyloidogenicplaque burden in a tissue and/or body fluids comprising

-   -   (a) obtaining a sample representative of the tissue and/or body        fluids under investigation;    -   (b) testing said sample for the presence of amyloid protein with        an antibody, particularly a monoclonal antibody according to the        invention, but particularly a chimeric antibody or a fragment        thereof, or a humanized antibody or a fragment thereof according        to the invention and as described herein before, and/or a        functional part thereof;    -   (c) determining the amount of antibody bound to the protein; and    -   (d) calculating the plaque burden in the tissue and/or body        fluids.

In particular, the invention relates to a method of determining theextent of amyloidogenic plaque burden in a tissue and/or body fluids,wherein the formation of the immunological complex in step c) isdetermined such that presence or absence of the immunological complexcorrelates with presence or absence of amyloid protein.

In another embodiment of the invention, a test kit for detection anddiagnosis of amyloid-associated diseases and conditions is providedcomprising an antibody, particularly a monoclonal antibody according tothe invention, but particularly a chimeric antibody or a fragmentthereof, or a humanized antibody or a fragment thereof according to theinvention and as described herein before, and/or a functional partthereof.

In particular, the invention relates to a test kit for detection anddiagnosis of amyloid-associated diseases and conditions comprising acontainer holding one or more antibodies according to the presentinvention, and/or a functional part thereof, and instructions for usingthe antibodies for the purpose of binding to amyloid protein to form animmunological complex and detecting the formation of the immunologicalcomplex such that presence or absence of the immunological complexcorrelates with presence or absence of amyloid protein.

In another aspect, the invention provides an antibody comprising avariable region as recited in SEQ ID NO: 27, or a variant thereof. Inone embodiment, a cell line expressing the antibody.

In another aspect, the invention provides an antibody gene comprising avariable region as recited in SEQ ID NO: 29, or a variant thereof. Inone embodiment, a cell line expresses the antibody.

In another aspect, the invention provides a method for disaggregatingpreformed beta-amyloid fibers, comprising interacting an hC2 antibodywith preformed beta-amyloid fibers.

In another aspect, the invention provides a humanized antibody or afragment thereof according to any of the preceding claims, wherein saidantibody or fragment thereof protects neurons from Abeta-induceddegradation.

In another aspect, the invention provides a method of preventingAbeta-induced neuron degradation comprising treating neurons with aneffective amount of a humanized antibody or a fragment thereof accordingto the disclosure herein.

In another aspect, the invention provides use of a humanized antibody ora fragment thereof according to the description herein for thepreparation of a medicament for preventing degeneration of neurons uponexposure to Abeta oligomer.

In another embodiment of the invention, an antibody, particularly amonoclonal antibody, including any functionally equivalent antibody orfunctional parts thereof is provided, which recognized the nativeconformation of amyloid in that it specifically binds to amyloidoligomers and fibers, but not to not linearized amyloid species.

In a further embodiment of the invention, an antibody, particularly amonoclonal antibody, including any functionally equivalent antibody orfunctional parts thereof according to the present invention and asdescribed herein before, is provided which antibody or fragment binds toan Aβ monomer with a binding affinity of at least about 1×10⁻⁶ to atleast about 1×10⁻⁸, particularly of at least about 1×10⁻⁶ to at leastabout 1×10⁻⁷, more particularly of at least about 1×10⁻⁷ to at leastabout 1×10⁻⁸, even more particularly of at least about 1×10⁻⁷ to atleast about 4×10⁻⁷ but, preferably, does not show any significantcross-reactivity with amyloid precursor protein (APP).

In another embodiment of the invention, an antibody, particularly amonoclonal antibody, including any functionally equivalent antibody orfunctional parts thereof according to the present invention and asdescribed herein before, is provided which antibody or fragment binds toan Aβ fiber, fibril or filament with a binding affinity of at leastabout 1×10⁻⁷ to at least about 1×10⁻⁹, particularly of at least about1×10⁻⁷ to at least about 1×10⁻⁸, more particularly of at least about1×10⁻⁸ to at least about 1×10⁻⁹, even more particularly of at leastabout 1×10⁻⁸ to at least about 5×10⁻⁸, but, preferably, does not showany significant cross-reactivity with amyloid precursor protein (APP).

In another embodiment, the antibody, particularly a monoclonal antibody,including any functionally equivalent antibody or functional partsthereof according to the present invention and as described hereinbefore exhibits an binding affinity to an Aβ fiber, fibril or filamentwhich is at least 5 times, particularly at least 10 times, moreparticularly at least 15 times, higher than the binding affinity to anAβ monomer.

Through the disaggregation of amyloidogenic polymeric fibrils orfilaments the antibodies according to the present invention are capableof preventing or slowing down the formation of amyloid plaques whichleads to an alleviation of the symptoms associated with the disease anda delay or reversal of its progression.

Accordingly, it is a further embodiment of the invention to provide anantibody, particularly a monoclonal antibody, including any functionallyequivalent antibody or functional parts thereof as described hereinbefore, which antibody is capable of decreasing the total amount of Aβin the brain of an animal, particularly a mammal, but especially a humansuffering from a disease or condition leading to increased concentrationof Aβ in the brain.

In another embodiment of the invention an antibody, particularly amonoclonal antibody, including any functionally equivalent antibody orfunctional parts thereof as described herein before is provided, whichantibody is capable of disrupting plaques thus decreasing the plaqueload in the brain of an animal, particularly a mammal, but especially ahuman suffering from a disease or condition leading to an increasedplaque load in the brain. The antibody according to the inventionincluding any functionally equivalent antibody or functional partsthereof decreases the plaque load in the brain by at least 20%,particularly by at least 25%, more particularly by at least 30%, evenmore particularly more than 30%.

In still another embodiment of the invention an antibody, particularly amonoclonal antibody, including any functionally equivalent antibody orfunctional parts thereof as described herein before is provided, whichantibody is capable of solubilizing plaques leading to a reduction ofthe amount of plaques in the brain of an animal, particularly a mammal,but especially a human suffering from a disease or condition leading toan increased plaque load in the brain. The antibody according to theinvention including any functionally equivalent antibody or functionalparts thereof reduces the amount of plaques in the brain by at least10%, particularly by at least 15%, more particularly by at least 20%.

It is to be understood that the antibody according to the invention canexhibit one, two or more of the specific properties described hereinbefore in various combinations.

In particular, an antibody or a fragment thereof is provided, whichrecognizes and binds to at least one distinct binding site, particularlyto a least two distinct binding sites on the β-amyloid protein whereinthe said at least one or said at least two distinct binding sitescomprise at least one amino acid residue and at least two consecutiveamino acid residues, respectively, predominantly involved in the bindingof the antibody, wherein, in a specific embodiment of the invention, theat least one residue constituting the first distinct binding site is Leuand the at least two consecutive amino acid residues, constituting thesecond distinct binding site, are -Phe-Phe- embedded within thefollowing core sequence:

-Xaa₁-Xaa₂-Xaa₃-Leu-Xaa₄-Phe-Phe-Xaa₅-Xaa₆-Xaa₇-

-   -   wherein    -   Xaa₁ is an amino acid residue selected from the group comprising        His, Asn, Gln Lys, and Arg;    -   Xaa₂ is an amino acid residue selected from the group comprising        Asn and Gln;    -   Xaa₃ is an amino acid residue selected from the group comprising        Lys, His, Asn, Gln and Arg    -   Xaa₄ is an amino acid residue selected from the group comprising        Ala, Val, Leu, norleucine, Met, Phe, and Ile;    -   Xaa₅ is an amino acid residue selected from the group comprising        Ala, Val, Leu, Ser and Ile;    -   Xaa₆ is an amino acid residue selected from the group comprising        Glu and Asp,    -   Xaa₇ is an amino acid residue selected from the group comprising        Glu and Asp.

In another aspect, the invention relates to an antibody or a fragmentthereof, which recognizes and binds to at least one distinct bindingsite, particularly to a least two distinct binding sites, moreparticularly to at least three distinct binding sites on the β-amyloidprotein, wherein said one or the at least two or the at least threedistinct binding sites each comprise at least one, particularly at leasttwo consecutive amino acid residues predominantly involved in thebinding of the antibody.

In particular, the antibody or a fragment thereof according to theinvention binds to at least two distinct binding sites on the β-amyloidprotein, wherein said at least two distinct binding sites each compriseat least two consecutive amino acid residues predominantly involved inthe binding of the antibody, wherein said at least two distinct bindingsites are located in close proximity to each other on the antigen,separated by at least one amino acid residue not involved in antibodybinding or to a significantly smaller extent as compared to said atleast two consecutive amino acid residues, thus forming a conformationaldiscontinuous epitope.

In another embodiment of the invention, an antibody or a fragmentthereof according to the invention is provided, which recognizes andbinds to at least one distinct binding site, particularly to a least twodistinct binding sites, more particularly to at least three distinctbinding sites on the β-amyloid protein wherein said distinct bindingsites comprise at least one and at least two consecutive amino acidresidues, respectively, predominantly involved in the binding of theantibody, wherein the at least one and the at least two consecutiveamino acids, which are separated by at least one amino acid residue notinvolved in antibody binding or to a significantly smaller extent ascompared to the amino acid residues predominantly involved in thebinding of the antibody, are -His- and -Lys-Leu-, respectively, embeddedwithin the following core sequence:

-His-Xaa₂-Lys-Leu-Xaa₃-Xaa₄-Xaa₅-Xaa₆--Xaa₇-Xaa₈-

-   -   wherein    -   Xaa₂ is an amino acid residue selected from the group comprising        Asn and Gln;    -   Xaa₃ is an amino acid residue selected from the group comprising        Ala, Val, Leu, norleucine, Met, Phe, and Ile;    -   Xaa₄ is an amino acid residue selected from the group comprising        Ala, Val, Leu, norleucine, Met, Phe, and Ile    -   Xaa₅ is an amino acid residue selected from the group comprising        Ala, Val, Leu, norleucine, Met, Phe, and Ile    -   Xaa₆ is an amino acid residue selected from the group comprising        Ala, Val, Leu, Ser and Ile;    -   Xaa₇ is an amino acid residue selected from the group comprising        Glu and Asp,    -   Xaa₈ is an amino acid residue selected from the group comprising        Glu and Asp    -   and wherein said amino acid residues Xaa₂, Xaa₃, Xaa₆, Xaa₇,        Xaa₈, are not involved in antibody binding or to a significantly        smaller extent as compared to the -His- and the -Lys-Leu-        binding site.

In another embodiment, an antibody or a fragment thereof is provided,which recognizes and binds to at least one distinct binding site,particularly to a least two distinct binding sites, more particularly toat least three distinct binding sites on the β-amyloid protein whereinsaid distinct binding sites comprise at least one and at least twoconsecutive amino acid residues, respectively, predominantly involved inthe binding of the antibody, wherein the at least two consecutive aminoacid residues representing a first binding site are -Phe-Phe- and the atleast one amino acid residue is -His- embedded within the following coresequence:

-Xaa₁-His-Xaa₃-Xaa₄-Xaa₅-Xaa₆-Phe-Phe-Xaa₇-Xaa₈- Xaa₉,

-   -   wherein    -   Xaa₁ is an amino acid residue selected from the group comprising        His, Asn, Gln, Lys and Arg    -   Xaa₃ is an amino acid residue selected from the group comprising        Asn and Gln    -   Xaa₄ is an amino acid residue selected from the group comprising        His, Asn, Gln, Lys and Arg    -   Xaa₅ is an amino acid residue selected from the group comprising        Ala, Val, Leu, Ser and Ile;    -   Xaa₆ is an amino acid residue selected from the group comprising        Ala, Val, Leu and Ile    -   Xaa₇ is an amino acid residue selected from the group comprising        Ala, Val, Leu and Ile    -   Xaa₈ is an amino acid residue selected from the group comprising        Glu and Asp,    -   Xaa₉ is an amino acid residue selected from the group comprising        Glu and Asp, and wherein said amino acid residues Xaa₁, Xaa₃,        Xaa₆, Xaa₇, Xaa₈ and Xaa₉, are not involved in antibody binding        or to a significantly smaller extent as compared to the His and        the -Phe-Phe- binding site.

In a specific embodiment of the invention, the first of at least twoconsecutive amino acid residues predominantly involved in the binding ofthe antibody involve -Lys- and -Leu-, and the second of the at least twoconsecutive amino acid residues involve -Phe-Phe- embedded within thefollowing core sequence:

-Xaa₁-Xaa₂-Lys-Leu-Xaa₄-Phe-Phe-Xaa₅-Xaa₆-Xaa₇-

-   -   wherein    -   Xaa₁ is an amino acid residue selected from the group comprising        His, Asn, Gln Lys, and Arg;    -   Xaa₂ is an amino acid residue selected from the group comprising        Asn and Gln;    -   Xaa₄ is an amino acid residue selected from the group comprising        Ala, Val, Leu, norleucine, Met, Phe, and Ile;    -   Xaa₅ is an amino acid residue selected from the group comprising        Ala, Val, Leu, Ser and Ile;    -   Xaa₆ is an amino acid residue selected from the group comprising        Glu and Asp,    -   Xaa₇ is an amino acid residue selected from the group comprising        Glu and Asp, and wherein said amino acid residues Xaa₂, Xaa₃,        Xaa₄, Xaa₅, Xaa₆, Xaa₇ are not involved in antibody binding or        to a significantly smaller extent as compared to the -Lys-Leu        and the -Phe-Phe- binding site.

In another embodiment of the invention, an antibody or a fragmentthereof is provided, wherein

-   -   Xaa₁ is His or Arg, but particularly His;    -   Xaa₂ is Gln or Asn, but particularly Gln;    -   Xaa₄ is Val or Leu, but particularly Val;    -   Xaa₅ is Ala or Val, but particularly Ala;    -   Xaa₆ is Glu or Asp, but particularly Glu; and    -   Xaa₇ is Asp or Glu, but particularly Asp.

In a further embodiment of the invention, the antibody or a fragmentthereof according to the invention binds to at least three distinctbinding sites on the β-amyloid protein wherein said at least threedistinct binding sites comprise at least one amino acid residue and atleast two consecutive amino acid residues, respectively, which residuesare predominantly involved in the binding of the antibody, wherein saidat least three distinct binding sites are located in close proximity toeach other on the antigen, separated by at least one amino acid residuenot involved in antibody binding or to a significantly smaller extent ascompared to said at least one amino acid residue and said at least twoconsecutive amino acid residues, respectively, thus forming aconformational discontinuous epitope.

In a specific embodiment of the invention, the first of the at least twoconsecutive amino acid residues predominantly involved in the binding ofthe antibody involve -Lys-Leu-, and the second of the at least twoconsecutive amino acid residues involve -Phe-Phe-, and the third atleast one amino residue involves -His- embedded within the followingcore sequence:

-His-Xaa₂-Lys-Leu-Xaa₄-Phe-Phe-Xaa₅-Xaa₆-Xaa₇-

-   -   wherein    -   Xaa₂ is an amino acid residue selected from the group comprising        Asn and Gln;    -   Xaa₄ is an amino acid residue selected from the group comprising        Ala, Val, Leu, norleucine, Met, Phe, and Ile;    -   Xaa₅ is an amino acid residue selected from the group comprising        Ala, Val, Leu, Ser and Ile;    -   Xaa₆ is an amino acid residue selected from the group comprising        Glu and Asp,    -   Xaa₇ is an amino acid residue selected from the group comprising        Glu and Asp, and wherein said amino acid residues Xaa₂, Xaa₃,        Xaa₄, Xaa₅, Xaa₆, Xaa₇ are not involved in antibody binding or        to a significantly smaller extent as compared to the -His-, the        -Lys-Leu, and the -Phe-Phe- binding site.

In another embodiment of the invention, an antibody or a fragmentthereof is provided, wherein

-   -   Xaa₂ is Gln or Asn, but particularly Gln;    -   Xaa₄ is Val or Leu, but particularly Val;    -   Xaa₅ is Ala or Val, but particularly Ala;    -   Xaa₆ is Glu or Asp, but particularly Glu; and    -   Xaa₇ is Glu or Asp, but particularly Asp;

In a specific embodiment of the invention, the first of the at least twoconsecutive amino acid residues predominantly involved in the binding ofthe antibody involve -Lys-Leu-, and the second of the at least twoconsecutive amino acid residues involve -Phe-Phe-, and the third atleast one amino residue involves -Asp- embedded within the followingcore sequence:

-Xaa₁-Xaa₂-Lys-Leu-Xaa₄-Phe-Phe-Xaa₅-Xaa₆-Asp-

-   -   wherein    -   Xaa₁ is an amino acid residue selected from the group comprising        His, Asn, Gln Lys, and Arg;    -   Xaa₂ is an amino acid residue selected from the group comprising        Asn and Gln;    -   Xaa₄ is an amino acid residue selected from the group comprising        Ala, Val, Leu, norleucine, Met, Phe, and Ile;    -   Xaa₅ is an amino acid residue selected from the group comprising        Ala, Val, Leu, Ser and Ile;    -   Xaa₆ is an amino acid residue selected from the group comprising        Glu and Asp, and wherein said amino acid residues Xaa₂, Xaa₃,        Xaa₄, Xaa₅, Xaa₆, Xaa₇ are not involved in antibody binding or        to a significantly smaller extent as compared to the -Asp-, the        -Lys-Leu, and the -Phe-Phe- binding site.

In another embodiment of the invention, an antibody or a fragmentthereof is provided, wherein

-   -   Xaa₁ is His or Arg, but particularly His;    -   Xaa₂ is Gln or Asn, but particularly Gln;    -   Xaa₄ is Val or Leu, but particularly Val;    -   Xaa₅ is Ala or Val, but particularly Ala; and    -   Xaa₆ is Glu or Asp, but particularly Glu

In a further specific embodiment of the invention, an antibody or afragment thereof according to the invention is provided, which binds to4 distinct binding sites on the β-amyloid protein wherein said 4distinct binding sites comprise one amino acid residue and twoconsecutive amino acid residues, respectively, which residues arepredominantly involved in the binding of the antibody, wherein said 4distinct binding sites are located in close proximity to each other onthe antigen, separated by at least one amino acid residue not involvedin antibody binding or to a significantly smaller extent as compared tosaid one amino acid residue and said two consecutive amino acid residuesof the 4 distinct binding sites thus forming a conformationaldiscontinuous epitope.

In particular, the first of the two consecutive amino acid residuespredominantly involved in the binding of the antibody are -Lys-Leu-, andthe second of the at least two consecutive amino acid residues are-Phe-Phe-, the first of the single amino residues is -His- and thesecond of the single amino residues is -Asp- embedded within thefollowing core sequence:

-His-Xaa₂-Lys-Leu-Xaa₄-Phe-Phe-Xaa₅-Xaa₆-Asp-

-   -   wherein    -   Xaa₂ is an amino acid residue selected from the group comprising        Asn and Gln;    -   Xaa₄ is an amino acid residue selected from the group comprising        Ala, Val, Leu, norleucine, Met, Phe, and Ile;    -   Xaa₅ is an amino acid residue selected from the group comprising        Ala, Val, Leu, Ser and Ile;    -   Xaa₆ is an amino acid residue selected from the group comprising        Glu and Asp, and wherein said amino acid residues Xaa₂, Xaa₃,        Xaa₄, Xaa_(s), Xaa₆, Xaa₇ are not involved in antibody binding        or to a significantly smaller extent as compared to the -His-,        -Asp-, the -Lys-Leu, and the -Phe-Phe- binding site.

In a specific embodiment of the invention, the recognition and bindingsites as defined herein before are forming a conformationaldiscontinuous epitope localized in a region of the β-amyloid proteinbetween amino acid residue 12 to 24, particularly between residues 14 to23, more particularly between amino acid residues 14 and 20, wherein thethree distinct recognition and binding sites comprising 1 and 2 aminoacid residues, respectively, are located at position 16, 17, and atposition 19 and 20, and at position 14, respectively, which residues arepredominantly involved in the binding of the β-amyloid protein andwherein said three distinct recognition and binding sites are separatedby one amino acid residue located at position 15 and 18, respectively,which amino acids are not involved in the binding of the antigen or, atleast, to a substantially smaller extent.

In a specific embodiment, said consecutive amino acid residues,particularly -Lys-Leu- at position 16 and 17 and -Phe- Phe- at position19 and 20, which are predominantly involved in the binding of theβ-amyloid protein, are embedded into the following core region:

Val- His- His- Gln- Lys- Leu- Val- Phe- Phe- Ala- 12 13 14 15 16 17 1819 20 21 Glu- Asp 22 23

In a further specific embodiment, said consecutive amino acid residues,particularly -Lys- at position 16, -Leu- at position 17 and -Phe-Phe- atposition 19 and 20, and -His- at position 14, which are predominantlyinvolved in the binding of the β-amyloid protein are embedded into thefollowing core region:

Val- His- His- Gln- Lys- Leu- Val- Phe- Phe- Ala- 12 13 14 15 16 17 1819 20 21 Glu- Asp- 22 23

Also part of the invention is the use of a monoclonal antibody and/or afunctional part thereof according to the invention and as describedherein before and/or a pharmaceutical composition, or a mixturecomprising said antibody, for the preparation of a medicament fortreating or alleviating the effects of diseases and disorders which arecaused by or associated with amyloid or amyloid-like proteins includingamyloidosis, a group of diseases and disorders associated with amyloidplaque formation including secondary amyloidosis and age-relatedamyloidosis such as diseases including, but not limited to, neurologicaldisorders such as Alzheimer's Disease (AD and diseases or conditionscharacterized by a loss of cognitive memory capacity such as, forexample, mild cognitive impairment (MCI), Lewy body dementia, Down'ssyndrome, hereditary cerebral hemorrhage with amyloidosis (Dutch type);the Guam Parkinson-Dementia complex; as well as other diseases which arebased on or associated with amyloid-like proteins such as progressivesupranuclear palsy, multiple sclerosis; Creutzfeld Jacob disease,Parkinson's disease, HIV-related dementia, ALS (amyotropic lateralsclerosis), inclusion-body myositis (IBM), Adult Onset Diabetes; senilecardiac amyloidosis; endocrine tumors, and others, including maculardegeneration.

In another embodiment of the present invention a method is provided forthe preparation of a pharmaceutical composition using an antibodyaccording to the invention and/or a functional part thereof butespecially a monoclonal antibody and/or a functional part thereof or afunctionally equivalent antibody, for use in treating or alleviating theeffects of diseases and disorders which are caused by or associated withamyloid or amyloid-like proteins including amyloidosis, a group ofdiseases and disorders associated with amyloid plaque formationincluding secondary amyloidosis and age-related amyloidosis such asdiseases including, but not limited to, neurological disorders such asAlzheimer's Disease (AD) and diseases or conditions characterized by aloss of cognitive memory capacity such as, for example, mild cognitiveimpairment (MCI), Lewy body dementia, Down's syndrome, hereditarycerebral hemorrhage with amyloidosis (Dutch type); the GuamParkinson-Dementia complex; as well as other diseases which are based onor associated with amyloid-like proteins such as progressivesupranuclear palsy, multiple sclerosis; Creutzfeld Jacob disease,Parkinson's disease, HIV-related dementia, ALS (amyotropic lateralsclerosis), Adult Onset Diabetes; senile cardiac amyloidosis; endocrinetumors, and others, including macular degeneration comprisingformulating an antibody according to the invention in a pharmaceuticallyacceptable form.

The antibodies and/or functional parts thereof but especially themonoclonal antibodies and/or functional parts thereof or a functionallyequivalent antibody and the compositions and mixtures comprising saidantibody according to the present invention may be used for thepreparation of a medicament for preventing, treating or alleviating theeffects of diseases and disorders which are caused by or associated withamyloid or amyloid-like proteins including amyloidosis, a group ofdiseases and disorders associated with amyloid plaque formationincluding secondary amyloidosis and age-related amyloidosis including,but not limited to, neurological disorders such as Alzheimer's Disease(AD), including diseases or conditions characterized by a loss ofcognitive memory capacity such as, for example, mild cognitiveimpairment (MCI), Lewy body dementia, Down's syndrome, hereditarycerebral hemorrhage with amyloidosis (Dutch type); the GuamParkinson-Dementia complex; as well as other diseases which are based onor associated with amyloid-like proteins such as progressivesupranuclear palsy, multiple sclerosis; Creutzfeld Jacob disease,Parkinson's disease, HIV-related dementia, ALS (amyotropic lateralsclerosis), inclusion-body myositis (IBM), Adult Onset Diabetes; senilecardiac amyloidosis; endocrine tumors, and others, including maculardegeneration.

In a further embodiment of the invention a method is provided forreducing the plaque load in the brain of an animal, particularly amammal, but especially a human suffering from a disease or conditionleading to an increased plaque load in the brain comprisingadministering to an animal, particularly a mammal, more particularly ahuman in need of such a treatment, a therapeutically effective amount ofan antibody and/or a functional part thereof but especially of themonoclonal antibody and/or a functional part thereof or of afunctionally equivalent antibody according to the invention and asdescribed herein before, or a composition or a mixture comprising saidantibody.

In particular, the plaque load is reduced by at least 20%, particularlyby at least 25%, more particularly by at least 30%, even moreparticularly by more than 30%.

In a further embodiment of the invention a method for reducing theamount of plaques in the brain of an animal, particularly a mammal, butespecially a human suffering from a disease or condition leading to anincreased plaque load in the brain comprising administering to ananimal, particularly a mammal, more particularly a human in need of sucha treatment, a therapeutically effective amount of an antibody and/or afunctional part thereof but especially of the monoclonal antibody and/ora functional part thereof or of a functionally equivalent antibodyaccording to the invention and as described herein before, or acomposition or a mixture comprising said antibody.

In particular, the amount of plaques in the brain is reduced by at least10%, particularly by at least 15%, more particularly by more than 15%.

In still another embodiment of the invention a method for decreasing thetotal amount of soluble Aβ in the brain of an animal, particularly amammal, but especially a human suffering from a disease or conditionleading to increased concentrations of soluble Aβ in the braincomprising administering to an animal, particularly a mammal, moreparticularly a human in need of such a treatment, a therapeuticallyeffective amount of an antibody and/or a functional part thereof butespecially of the monoclonal antibody and/or a functional part thereofor of a functionally equivalent antibody according to the invention andas described herein before, or a composition or a mixture comprisingsaid antibody.

It is an objective of the present invention to provide a method forpreventing, treating or alleviating the effects of diseases anddisorders which are caused by or associated with amyloid or amyloid-likeproteins including amyloidosis, a group of diseases and disordersassociated with amyloid plaque formation including secondary amyloidosisand age-related amyloidosis including, but not limited to, neurologicaldisorders such as Alzheimer's Disease (AD), including diseases orconditions characterized by a loss of cognitive memory capacity such as,for example, mild cognitive impairment (MCI), Lewy body dementia, Down'ssyndrome, hereditary cerebral hemorrhage with amyloidosis (Dutch type);the Guam Parkinson-Dementia complex; as well as other diseases which arebased on or associated with amyloid-like proteins such as progressivesupranuclear palsy, multiple sclerosis; Creutzfeld Jacob disease,Parkinson's disease, HIV-related dementia, ALS (amyotropic lateralsclerosis), inclusion-body myositis (IBM), Adult Onset Diabetes; senilecardiac amyloidosis; endocrine tumors, and others, including maculardegeneration, by administering an antibody, but particularly amonoclonal antibody or a composition or mixture comprising such anantibody according to the invention to an animal or a human affected bysuch a disorder comprising administering to an animal, particularly amammal, more particularly a human in need of such a treatment, atherapeutically effective amount of an antibody and/or a functional partthereof but especially of the monoclonal antibody and/or a functionalpart thereof or of a functionally equivalent antibody according to theinvention and as described herein before, or a composition or a mixturecomprising said antibody.

In a specific embodiment the invention provides a method for retainingor increasing cognitive memory capacity of an animal, particularly amammal or a human suffering from memory impairment by administering toan animal, particularly a mammal or a human in need of such a treatment,an antibody, but particularly a monoclonal antibody according to theinvention or a composition or mixture comprising such an antibodyaccording to the invention and as described herein before.

In another embodiment of the present invention a method is provided forthe preparation of a pharmaceutical composition using an antibodyaccording to the invention and/or a functional part thereof butespecially a monoclonal antibody and/or a functional part thereof or afunctionally equivalent antibody for preventing, treating or alleviatingthe effects of diseases and disorders which are caused by or associatedwith amyloid or amyloid-like proteins including amyloidosis, a group ofdiseases and disorders associated with amyloid plaque formationincluding secondary amyloidosis and age-related amyloidosis such asdiseases including, but not limited to, neurological disorders such asAlzheimer's Disease (AD), including diseases or conditions characterizedby a loss of cognitive memory capacity such as, for example, mildcognitive impairment (MCI), Lewy body dementia, Down's syndrome,hereditary cerebral hemorrhage with amyloidosis (Dutch type); the GuamParkinson-Dementia complex; as well as other diseases which are based onor associated with amyloid-like proteins such as progressivesupranuclear palsy, multiple sclerosis; Creutzfeld Jacob disease,Parkinson's disease, HIV-related dementia, ALS (amyotropic lateralsclerosis), inclusion-body myositis (IBM), Adult Onset Diabetes; senilecardiac amyloidosis; endocrine tumors, and others, including maculardegeneration.

In a specific embodiment the invention provides a method for thepreparation of a pharmaceutical composition using an antibody accordingto the invention and/or a functional part thereof but especially amonoclonal antibody and/or a functional part thereof or a functionallyequivalent antibody for retaining or increasing cognitive memorycapacity of an animal, particularly a mammal or a human, suffering frommemory impairment by administering to an animal, particularly a mammalor a human, an antibody, but particularly a monoclonal antibody or acomposition or mixture comprising such an antibody according to theinvention and as described herein before.

These and other objects, features and advantages of the presentinvention will become apparent after a review of the following detaileddescription of the disclosed embodiment and the appended claims.

BRIEF DESCRIPTION OF FIGURES AND SEQUENCES

FIG. 1 (Example 2): Expression Cassette of the mouse light chainvariable region of the Chimeric Antibody;

FIG. 2 (Example 2): Expression Cassette of the mouse heavy chainvariable region of the Chimeric Antibody;

FIG. 3 (Example 5.2): Comparison of the mouse heavy chain variableregion to the closest murine germ line sequence;

FIG. 4 (Example 8): Activity of purified humanized C2 antibodies;

FIG. 5 (Example 9): Binding activity of antibodies produced by transientexpression of C2 modified CDRL2 constructs in conjunction with C2chimeric heavy chain, compared to chimeric antibody C2ChVHAF/ChVK,produced by transient transfection and purified antibody;

FIG. 6 (Example 11): Results of Immunohistochemical Binding Assay withchimeric antibody AF and humanized antibody H4K1;

FIG. 7 (Example 12): Functionality of mC2 on Amyloid fibers;

FIG. 8 (Example 12): Binding Affinity of humanized C2 in ELISA;

FIG. 9 (Example 14): Conformation specific binding of mC2 to differentclasses of amyloid protein. Pellet preparation in the legend to thisfigure refers to Aβ₁₋₄₂ fibers, supernatant preparation refers toamyloid monomers;

FIG. 10: Humanized C2 VK sequences compared to murine sequence and humanacceptor sequences DPK15 AND J_(K)1;

FIG. 11: Humanized C2 VH sequences compared to murine sequence and humanacceptor sequences DP54 AND J_(H)6;

FIG. 12: Complete DNA and protein sequence of light chain variableregion of C2 humanized antibody, C2HuVK1;

FIG. 13: Complete DNA and protein sequence of light chain constantregion (human C Kappa) of humanized C2 antibody;

FIG. 14: Complete DNA and protein sequence of heavy chain constantregion (human IgG4 ser228-pro) of humanized C2 antibody;

FIG. 15A-C (Example 15): Results of Epitope Mapping experiments;

FIG. 16 (Example 13): Results of aggregation assay experiments;

FIG. 17 (Example 13): Results of disaggregation assay experiments;

FIG. 18: (Example 16): Results of neuroprotection experiments withhumanized antibody C2;

FIG. 19: Binding of mACI-01-Ab7 C2 monoclonal antibody to amyloidspecies in Western blot and Dot blot;

FIG. 20: Binding of mACI-01-Ab7 C2 monoclonal antibody to amyloid fibersby transmission electronic microscopy;

FIG. 21: Results of a head-to-head-experiment between Th-T fluorescentassay and solid-state NMR of U-¹³C Tyr10 and Val12-labeled β-amyloid1-42 peptide.

-   SEQ ID NO: 1 Amino acid sequence of C2 HuVH AF 4 humanized heavy    chain variable region (CDR1)-   SEQ ID NO: 2 Amino acid sequence of C2 HuVH AF 4 humanized heavy    chain variable region (CDR2)-   SEQ ID NO: 3 Amino acid sequence of C2 HuVH AF 4 humanized heavy    chain variable region (CDR3)-   SEQ ID NO: 4 Amino acid sequence of C2 HuVK 1 humanized light chain    variable region (CDR1)-   SEQ ID NO: 5 Amino Acid Sequence of C2 HuVK 1 Humanized Light Chain    Variable Region (CDR2)-   SEQ ID NO: 6 Amino Acid Sequence of C2 HuVK 1 Humanized Light Chain    Variable Region (CDR3)-   SEQ ID NO: 7 Amino Acid Sequence of Aβ Epitope Region 2-   SEQ ID NO: 8 Amino acid sequence of Aβ epitope region 1-   SEQ ID NO: 9 Amino acid sequence of Aβ epitope region 2 modified-   SEQ ID NO: 10 Amino acid sequence of Aβ epitope region 1 modified-   SEQ ID NO: 11 Amino acid sequence of Epitope region modified    complete-   SEQ ID NO: 12 Amino acid sequence of C2 HuVK 1 humanized light chain    variable region-   SEQ ID NO: 13 Amino acid sequence of C2 humanized light chain-   SEQ ID NO: 14 Amino acid sequence of humanized C2 light chain    constant region-   SEQ ID NO: 15 Amino acid sequence of C2 HuVH AF 4 humanized heavy    chain variable region-   SEQ ID NO: 16 Amino acid sequence of C2 humanized heavy chain-   SEQ ID NO: 17: Amino acid sequence of IG GAMMA-4 CHAIN C REGION    modified-   SEQ ID NO: 18: Nucleotide sequence of CDR2 of C2 HuVH AF 4 humanised    heavy chain variable region-   SEQ ID NO: 19: Nucleotide sequence of CDR3 of C2 HuVH AF 4 humanised    heavy chain variable region-   SEQ ID NO: 20: Nucleotide sequence of CDR1 of C2 HuVK 1 humanised    light chain variable region-   SEQ ID NO: 21: Nucleotide sequence of C2 HuVK 1 humanized light    chain variable region-   SEQ ID NO: 22: Nucleotide sequence of C2 humanized light chain-   SEQ ID NO: 23: Nucleotide sequence of C2 humanized light chain    constant region-   SEQ ID NO: 24: Nucleotide sequence of C2 HuVH AF 4 humanized heavy    chain variable region-   SEQ ID NO: 25: Nucleotide sequence of C2 humanized heavy chain-   SEQ ID NO: 26: Nucleotide sequence of C2 humanized heavy chain    constant region-   SEQ ID NO: 27: Amino acid sequence of Mouse C2 Light Chain Variable    Region-   SEQ ID NO: 28: Amino acid sequence of Mouse C2 Heavy Chain Variable    Region-   SEQ ID NO: 29: Nucleotide sequence of Mouse C2 Light Chain Variable    Region-   SEQ ID NO: 30: Nucleotide sequence of Mouse C2 Light Chain-   SEQ ID NO: 31: Nucleotide sequence of Mouse C2 Heavy Chain Variable    Region-   SEQ ID NO: 32: Nucleotide sequence of Mouse C2 Heavy Chain-   SEQ ID NO: 33-40: Amino acid sequence variants of epitopic region on    the Aβ peptide-   SEQ ID NO: 41: Amino acid sequence of Mouse C2 Light Chain-   SEQ ID NO: 42: Amino acid sequence of Mouse C2 Heavy Chain-   SEQ ID NO: 43: Antigenic peptide Aβ₁₋₁₅-   SEQ ID NO: 44: Antigenic peptide Aβ₁₋₁₆-   SEQ ID NO: 45: Antigenic peptide Aβ_(1-16(Δ14))-   SEQ ID NO: 46: Antigenic peptide Aβ₂₂₋₃₅-   SEQ ID NO: 47: Antigenic peptide Aβ₂₉₋₄₀-   SEQ ID NO: 48: Antigenic peptide Aβ₁₋₁₇

DEFINITIONS

The terms “polypeptide”, “peptide”, and “protein”, as used herein, areinterchangeable and are defined to mean a biomolecule composed of aminoacids linked by a peptide bond.

The terms “a”, “an” and “the” as used herein are defined to mean “one ormore” and include the plural unless the context is inappropriate.

The language “diseases and disorders which are caused by or associatedwith amyloid or amyloid-like proteins” includes, but is not limited to,diseases and disorders caused by the presence or activity ofamyloid-like proteins in monomeric, fibril, or polymeric state, or anycombination of the three. Such diseases and disorders include, but arenot limited to, amyloidosis, endocrine tumors, and macular degeneration.

The term “amyloidosis” refers to a group of diseases and disordersassociated with amyloid plaque formation including, but not limited to,secondary amyloidosis and age-related amyloidosis such as diseasesincluding, but not limited to, neurological disorders such asAlzheimer's Disease (AD), including diseases or conditions characterizedby a loss of cognitive memory capacity such as, for example, mildcognitive impairment (MCI), Lewy body dementia, Down's syndrome,hereditary cerebral hemorrhage with amyloidosis (Dutch type); the GuamParkinson-Dementia complex; as well as other diseases which are based onor associated with amyloid-like proteins such as progressivesupranuclear palsy, multiple sclerosis; Creutzfeld Jacob disease,Parkinson's disease, HIV-related dementia, ALS (amyotropic lateralsclerosis), inclusion-body myositis (IBM), Adult Onset Diabetes, andsenile cardiac amyloidosis; and various eye diseases including maculardegeneration, drusen-related optic neuropathy, and cataract due tobeta-amyloid deposition.

The terms “detecting” or “detected” as used herein mean using knowntechniques for detection of biologic molecules such as immunochemical orhistological methods and refer to qualitatively or quantitativelydetermining the presence or concentration of the biomolecule underinvestigation.

“Polymeric soluble amyloid” refers to multiple aggregated monomers ofamyloid peptides, or of amyloid-like peptides, or of modified ortruncated amyloid peptides or of other derivates of amyloid peptidesforming oligomeric or polymeric structures which are soluble in themammalian or human body more particularly in the brain, but particularlyto multiple aggregated monomers of amyloid β (Aβ) or of modified ortruncated amyloid β (Aβ) peptides or of derivatives thereof, which aresoluble in the mammalian or human body more particularly in the brain.

“Amyloid β, Aβ or β-amyloid” is an art recognized term and refers toamyloid β proteins and peptides, amyloid β precursor protein (APP), aswell as modifications, fragments and any functional equivalents thereof.In particular, by amyloid as used herein is meant any fragment producedby proteolytic cleavage of APP but especially those fragments which areinvolved in or associated with the amyloid pathologies including, butnot limited to, Aβ₁₋₃₈, Aβ₁₋₃₉, Aβ₁₋₄₀, Aβ₁₋₄₁ Aβ₁₋₄₂ and Aβ₁₋₄₃.

The structure and sequences of the amyloid β peptides as mentioned aboveare well known to those skilled in the art and methods of producing saidpeptides or of extracting them from brain and other tissues aredescribed, for example, in Glenner and Wong, Biochem Biophys Res Comm129, 885-890 (1984). Moreover, amyloid /3 peptides are also commerciallyavailable in various forms.

By “isolated” is meant a biological molecule free from at least some ofthe components with which it naturally occurs.

The terms “antibody” or “antibodies” as used herein are art-recognizedterms and are understood to refer to molecules or active fragments ofmolecules that bind to known antigens, particularly to immunoglobulinmolecules and to immunologically active portions of immunoglobulinmolecules, i.e molecules that contain a binding site that specificallybinds an antigen. An immunoglobulin is a protein comprising one or morepolypeptides substantially encoded by the immunoglobulin kappa andlambda, alpha, gamma, delta, epsilon and mu constant region genes, aswell as myriad immunoglobulin variable region genes. Light chains areclassified as either kappa or lambda. Heavy chains are classified asgamma, mu, alpha, delta, or epsilon, which in turn define theimmunoglobulin classes, IgG, IgM, IgA, IgD and IgE, respectively. Alsosubclasses of the heavy chain are known. For example, IgG heavy chainsin humans can be any of IgG1, IgG2, IgG3 and IgG4 subclass. Theimmunoglobulin according to the invention can be of any class (IgG, IgM,IgD, IgE, IgA and IgY) or subclass (IgG1, IgG2, IgG3, IgG4, IgA1 andIgA2) of immunoglobulin molecule.

As used herein “specifically binds” in reference to an antibody meansthat the antibody binds to its target antigen with greater affinity thatit does to a structurally different antigen(s).

A typical immunoglobulin structural unit is known to comprise atetramer. Each tetramer is composed of two identical pairs ofpolypeptide chains, each pair having one “light” (about 25 kD) and one“heavy” chain (about 50-70 kD). The N-terminus of each chain defines avariable region of about 100 to 110 or more amino acids primarilyresponsible for antigen recognition. The terms variable light chain(V_(L)) and variable heavy chain (V_(H)) refer to these light and heavychains respectively.

Antibodies exist as full length intact antibodies or as a number ofwell-characterized fragments produced by digestion with variouspeptidases or chemicals. Thus, for example, pepsin digests an antibodybelow the disulfide linkages in the hinge region to produce F(ab′)₂, adimer of Fab which itself is a light chain joined to V_(H)-CH₁ by adisulfide bond. The F(ab′)₂ may be reduced under mild conditions tobreak the disulfide linkage in the hinge region thereby converting theF(ab′)₂ dimer into an Fab′ monomer. The Fab′ monomer is essentially aFab fragment with part of the hinge region (see, Fundamental Immunology,W. E. Paul, ed., Raven Press, N.Y. (1993), for a more detaileddescription of other antibody fragments). While various antibodyfragments are defined in terms of the digestion of an intact antibody,one of skill will appreciate that any of a variety of antibody fragmentsmay be synthesized de novo either chemically or by utilizing recombinantDNA methodology. Thus, the term antibody, as used herein also includesantibody fragments either produced by the modification of wholeantibodies or synthesized de novo or antibodies and fragments obtainedby using recombinant DNA methodologies.

“Antibodies” are intended within the scope of the present invention toinclude monoclonal antibodies, polyclonal antibodies, chimeric, singlechain, bispecific, simianized, human and humanized antibodies as well asactive fragments thereof. Examples of active fragments of molecules thatbind to known antigens include separated light and heavy chains, Fab,Fab/c, Fv, Fab′, and F(ab′)₂ fragments, including the products of an Fabimmunoglobulin expression library and epitope-binding fragments of anyof the antibodies and fragments mentioned above.

These active fragments can be derived from an antibody of the presentinvention by a number of techniques. For example, monoclonal antibodiescan be cleaved with an enzyme, such as pepsin, and subjected to HPLC gelfiltration. The appropriate fraction containing Fab fragments can thenbe collected and concentrated by membrane filtration and the like. Forfurther description of general techniques for the isolation of activefragments of antibodies, see for example, Khaw, B. A. et al. J. Nucl.Med. 23:1011-1019 (1982); Rousseaux et al. Methods Enzymology,121:663-69, Academic Press, 1986.

Recombinantly made antibodies may be conventional full lengthantibodies, active antibody fragments known from proteolytic digestion,unique active antibody fragments such as Fv or single chain Fv (scFv),domain deleted antibodies, and the like. An Fv antibody is about 50 Kdin size and comprises the variable regions of the light and heavy chain.A single chain Fv (“scFv”) polypeptide is a covalently linked VH::VLheterodimer which may be expressed from a nucleic acid including VH- andVL-encoding sequences either joined directly or joined by apeptide-encoding linker. See Huston, et al. (1988) Proc. Nat. Acad. Sci.USA, 85:5879-5883. A number of structures for converting the naturallyaggregated, but chemically separated light and heavy polypeptide chainsfrom an antibody V region into an scFv molecule which will fold into athree dimensional structure substantially similar to the structure of anantigen-binding site. See, e.g. U.S. Pat. Nos. 5,091,513, 5,132,405 and4,956,778.

The combining site refers to the part of an antibody molecule thatparticipates in antigen binding. The antigen binding site is formed byamino acid residues of the N-terminal variable (“V”) regions of theheavy (“H”) and light (“L”) chains. The antibody variable regionscomprise three highly divergent stretches referred to as “hypervariableregions” or “complementarity determining regions” (CDRs) which areinterposed between more conserved flanking stretches known as “frameworkregions” (FRs). In an antibody molecule, the three hypervariable regionsof a light chain (LCDR1, LCDR2, and LCDR3) and the three hypervariableregions of a heavy chain (HCDR1, HCDR2 and HCDR3) are disposed relativeto each other in three dimensional space to form an antigen bindingsurface or pocket. The antibody combining site therefore represents theamino acids that make up the CDRs of an antibody and any frameworkresidues that make up the binding site pocket.

The identity of the amino acid residues in a particular antibody thatmake up the combining site can be determined using methods well known inthe art. For example, antibody CDRs may be identified as thehypervariable regions originally defined by Kabat et al. (see,“Sequences of Proteins of Immunological Interest,” E. Kabat et al., U.S.Department of Health and Human Services; Johnson, G and Wu, T T (2001)Kabat Database and its applications: future directions. Nucleic AcidsResearch, 29: 205-206; http://immuno.bme.nwa.edu). The positions of theCDRs may also be identified as the structural loop structures originallydescribed by Chothia and others, (see Chothia and Lesk, J. Mol. Biol.196, 901 (1987), Chothia et al., Nature 342, 877 (1989), and Tramontanoet al., J. Mol. Biol. 215, 175 (1990)). Other methods include the “AbMdefinition” which is a compromise between Kabat and Chothia and isderived using Oxford Molecular's AbM antibody modeling software (nowAccelrys) or the “contact definition” of CDRs by Macallum et al.,(“Antibody-antigen interactions: contact analysis and binding sitetopography,” J Mol Biol. 1996 Oct. 11; 262(5):732-45). The followingchart identifies CDRs based upon various known definitions.

Loop Kabat AbM Chothia Contact L1 L24--L34 L24--L34 L24--L34 L30--L36 L2L50--L56 L50--L56 L50--L56 L46--L55 L3 L89--L97 L89--L97 L89--L97L89--L96 H1 H31--H35B H26--H35B H26--H32 . . . 34 H30--H35B (KabatNumbering) H1 H31--H35 H26--H35 H26--H32 H30--H35 (Chothia Numbering) H2H50--H65 H50--H58 H52--H56 H47--H58 H3 H95--H102 H95--H102 H95--H102H93--H101

General guidelines by which one may identify the CDRs in an antibodyfrom sequence alone are as follows:

LCDR1 :

Start—Approximately residue 24.

Residue before is always a Cys.

Residue after is always a Trp. Typically TRP is followed with TYR-GLN,but also may be followed by LEU-GLN, PHE-GLN, or TYR-LEU.

Length is 10 to 17 residues.

LCDR2:

Start—16 residues after the end of L1.

Sequence before is generally ILE-TYR, but also may be VAL-TYR, ILE-LYS,or ILE-PHE.

Length is generally 7 residues.

LCDR3:

Start—generally 33 residues after end of L2.

Residue before is a Cys.

Sequence after is PHE-GLY-X-GLY.

Length is 7 to 11 residues.

HCDR1:

Start—at approximately residue 26 (four residues after a CYS)[Chothia/AbM definition] Kabat definition starts 5 residues later.

Sequence before is CYS-X-X-X.

Residues after is a TRP, typically followed by VAL, but also followed byILE, or ALA.

Length is 10 to 12 residues under AbM definition while Chothiadefinition excludes the last 4 residues.

HCDR2:

Start—15 residues after the end of Kabat/AbM definition of CDR-H1.

Sequence before typically LEU-GLU-TRP-ILE-GLY (SEQ ID NO. 1), but anumber of variations are possible.

Sequence after is LYS/ARG-LEU/ILE/VAL/PHE/THR/ALA-THR/SER/ILE/ALA

Length is 16 to 19 residues under Kabat definition (AbM definition ends7 residues earlier).

HCDR3:

Start—33 residues after end of CDR-H2 (two residues after a CYS).

Sequence before is CYS-X-X (typically CYS-ALA-ARG).

Sequence after is TRP-GLY-X-GLY.

Length is 3 to 25 residues.

The identity of the amino acid residues in a particular antibody thatare outside the CDRs, but nonetheless make up part of the combining siteby having a side chain that is part of the lining of the combining site(i.e., it is available to linkage through the combining site), can bedetermined using methods well known in the art such as molecularmodeling and X-ray crystallography. See e.g., Riechmann et al., (1988)Nature, 332:323-327.

Chimeric antibodies are those in which one or more regions of theantibody are from one species of animal and one or more regions of theantibody are from a different species of animal. A preferred chimericantibody is one which includes regions from a primate immunoglobulin. Achimeric antibody for human clinical use is typically understood to havevariable regions from a non-human animal, e.g. a rodent, with theconstant regions from a human. In contrast, a humanized antibody usesCDRs from the non-human antibody with most or all of the variableframework regions from and all the constant regions from a humanimmunoglobulin. A human chimeric antibody is typically understood tohave the variable regions from a rodent. A typical human chimericantibody has human heavy constant regions and human light chain constantregions with the variable regions of both the heavy and light comingfrom a rodent antibody. A chimeric antibody may include some changes toa native amino acid sequence of the human constant regions and thenative rodent variable region sequence. Chimeric and humanizedantibodies may be prepared by methods well known in the art includingCDR grafting approaches (see, e.g., U.S. Pat. Nos. 5,843,708; 6,180,370;5,693,762; 5,585,089; 5,530,101), chain shuffling strategies (see e.g.,U.S. Pat. No. 5,565,332; Rader et al., Proc. Natl. Acad. Sci. USA (1998)95:8910-8915), molecular modeling strategies (U.S. Pat. No. 5,639,641),and the like.

A “humanized antibody” as used herein in the case of a two chainantibody is one where at least one chain is humanized. A humanizedantibody chain has a variable region where one or more of the frameworkregions are human. A humanized antibody which is a single chain is onewhere the chain has a variable region where one or more of the frameworkregions are human. The non-human portions of the variable region of thehumanized antibody chain or fragment thereof is derived from a non-humansource, particularly a non-human antibody, typically of rodent origin.The non-human contribution to the humanized antibody is typicallyprovided in form at least one CDR region which is interspersed amongframework regions derived from one (or more) human immunoglobulin(s). Inaddition, framework support residues may be altered to preserve bindingaffinity.

The humanized antibody may further comprise constant regions (e.g., atleast one constant region or portion thereof, in the case of a lightchain, and preferably three constant regions in the case of a heavychain). The constant regions of a humanized antibody if presentgenerally are human.

Methods to obtain “humanized antibodies” are well known to those skilledin the art. (see, e.g., Queen et al., Proc. Natl Acad Sci USA,86:10029-10032 (1989), Hodgson et al., Bio/Technology, 9:421 (1991)).

A “humanized antibody” may also be obtained by a novel geneticengineering approach that enables production of affinity-maturedhuman-like polyclonal antibodies in large animals such as, for example,rabbits and mice. See, e.g. U.S. Pat. No. 6,632,976.

The term constant region (CR) as used herein refers to constant regionsgenes of the immunoglobulin. The constant region genes encode theportion of the antibody molecule which confers effector functions. ForChimeric human antibodies and humanized antibodies, typically non-human(e.g., murine), constant regions are substituted by human constantregions. The constant regions of the subject chimeric or humanizedantibodies are typically derived from human immunoglobulins. The heavychain constant region can be selected from any of the five isotypes:alpha, delta, epsilon, gamma or mu. Further, heavy chains of varioussubclasses (such as the IgG subclasses of heavy chains) are responsiblefor different effector functions and thus, by choosing the desired heavychain constant region, antibodies with desired effector function can beproduced. Constant regions that may be used within the scope of thisinvention are gamma 1 (IgG1), particularly an Fc region of the gamma 1(IgG1) isotype, gamma 3 (IgG3) and especially gamma 4 (IgG4). The lightchain constant region can be of the kappa or lambda type, preferably ofthe kappa type. In one embodiment the light chain constant region is thehuman kappa constant chain (Heiter et al. (1980) Cell 22:197-207) andthe heavy constant chain is the human IgG4 constant chain.

The term “monoclonal antibody” is also well recognized in the art andrefers to an antibody that is the product of a single cloned antibodyproducing cell. Monoclonal antibodies are typically made by fusing anormally short-lived, antibody-producing B cell to a fast-growing cell,such as a cancer cell (sometimes referred to as an “immortal” cell). Theresulting hybrid cell, or hybridoma, multiplies rapidly, creating aclone that produces the antibody.

For the purpose of the present invention, “monoclonal antibody” is alsoto be understood to comprise antibodies that are produced by a motherclone which has not yet reached full monoclonality.

“Functionally equivalent antibody” is understood within the scope of thepresent invention to refer to an antibody which substantially shares atleast one major functional property with an antibody mentioned above andherein described comprising: binding specificity to the β-amyloidprotein, particularly to the Aβ₁₋₄₂ protein, and more particularly tothe 16-21 epitope region of the Aβ₁₋₄₂ protein, immunoreactivity invitro, inhibition of aggregation of the Aβ₁₋₄₂ monomers into highmolecular polymeric fibrils and/or disaggregation of preformed Aβ₁₋₄₂polymeric fibrils, and/or a β-sheet breaking property and alleviatingthe effects of amyloidosis, a group of diseases and disorders associatedwith amyloid plaque formation including secondary amyloidosis andage-related amyloidosis such as diseases including, but not limited to,neurological disorders such as Alzheimer's Disease (AD), Lewy bodydementia, Down's syndrome, hereditary cerebral hemorrhage withamyloidosis (Dutch type); the Guam Parkinson-Dementia complex; as wellas other diseases which are based on or associated with amyloid-likeproteins such as progressive supranuclear palsy, multiple sclerosis;Creutzfeld Jacob disease, Parkinson's disease, HIV-related dementia, ALS(amyotropic lateral sclerosis), Adult Onset Diabetes; senile cardiacamyloidosis; endocrine tumors, and others, including maculardegeneration, when administered prophylactically or therapeutically. Theantibodies can be of any class such as IgG, IgM, or IgA, etc or anysubclass such as IgG1, IgG2a, etc and other subclasses mentioned hereinabove or known in the art, but particularly of the IgG4 class. Further,the antibodies can be produced by any method, such as phage display, orproduced in any organism or cell line, including bacteria, insect,mammal or other type of cell or cell line which produces antibodies withdesired characteristics, such as humanized antibodies. The antibodiescan also be formed by combining a Fab portion and an Fc region fromdifferent species.

The term “hybridize” as used refers to conventional hybridizationconditions, preferably to hybridization conditions at which 5×SSPE, 1%SDS, 1×Denhardts solution is used as a solution and/or hybridizationtemperatures are between 35° C. and 70° C., preferably 65° C. Afterhybridization, washing is preferably carried out first with 2×SSC, 1%SDS and subsequently with 0.2×SSC at temperatures between 35° C. and 70°C., preferably at 65° C. (regarding the definition of SSPE, SSC andDenhardts solution see Sambrook et al. loc. cit.). Stringenthybridization conditions as for instance described in Sambrook et al,supra, are particularly preferred. Particularly preferred stringenthybridization conditions are for instance present if hybridization andwashing occur at 65° C. as indicated above. Non-stringent hybridizationconditions, for instance with hybridization and washing carried out at45° C. are less preferred and at 35° C. even less.

“Homology” between two sequences is determined by sequence identity. Iftwo sequences which are to be compared with each other differ in length,sequence identity preferably relates to the percentage of the nucleotideresidues of the shorter sequence which are identical with the nucleotideresidues of the longer sequence. Sequence identity can be determinedconventionally with the use of computer programs such as the Bestfitprogram (Wisconsin Sequence Analysis Package, Version 8 for Unix,Genetics Computer Group, University Research Park, 575 Science DriveMadison, Wis. 53711). Bestfit utilizes the local homology algorithm ofSmith and Waterman, Advances in Applied Mathematics 2 (1981), 482-489,in order to find the segment having the highest sequence identitybetween two sequences. When using Bestfit or another sequence alignmentprogram to determine whether a particular sequence has for instance 95%identity with a reference sequence of the present invention, theparameters are preferably so adjusted that the percentage of identity iscalculated over the entire length of the reference sequence and thathomology gaps of up to 5% of the total number of the nucleotides in thereference sequence are permitted. When using Bestfit, the so-calledoptional parameters are preferably left at their preset (“default”)values. The deviations appearing in the comparison between a givensequence and the above-described sequences of the invention may becaused for instance by addition, deletion, substitution, insertion orrecombination. Such a sequence comparison can preferably also be carriedout with the program “fasta20u66” (version 2.0u66, September 1998 byWilliam R. Pearson and the University of Virginia; see also W.R. Pearson(1990), Methods in Enzymology 183, 63-98, appended examples andhttp://workbench.sdsc.edu/). For this purpose, the “default” parametersettings may be used.

The antibody according to the invention may be an immunoglobulin orantibody, which is understood to have each of its binding sitesidentical (if multivalent) or, in the alternative, may be a “bispecific”or “bifunctional antibody”.

A “bispecific” or “bifunctional antibody” is an artificial hybridantibody having two different heavy/light chain pairs and two differentbinding sites. Bispecific antibodies can be produced by a variety ofmethods including fusion of hybridomas or linking of Fab′ fragments.See, e.g., Songsivilai & Lachmann, Clin. Exp. Immunol. 79:315-321(1990); Kostelny et al., J. Immunol. 148, 1547-1553 (1992).

The term “fragment” refers to a part or portion of an antibody orantibody chain comprising fewer amino acid residues than an intact orcomplete antibody or antibody chain. Fragments can be obtained viachemical or enzymatic treatment of an intact or complete antibody orantibody chain. Fragments can also be obtained by recombinant means.Exemplary fragments include Fab, Fab′, F(ab′)2, Fabc and/or Fvfragments. The term “antigen-binding fragment” refers to a polypeptidefragment of an immunoglobulin or antibody that binds antigen or competeswith intact antibody (i.e., with the intact antibody from which theywere derived) for antigen binding (i.e., specific binding).

Binding fragments are produced by recombinant DNA techniques, or byenzymatic or chemical cleavage of intact immunoglobulins. Bindingfragments include Fab, Fab′, F(ab′)₂, Fabc, Fv, single chains, andsingle-chain antibodies.

“Fragment” also refers to a peptide or polypeptide comprising an aminoacid sequence of at least 5 contiguous amino acid residues, at least 10contiguous amino acid residues, at least 15 contiguous amino acidresidues, at least 20 contiguous amino acid residues, at least 25contiguous amino acid residues, at least 40 contiguous amino acidresidues, at least 50 contiguous amino acid residues, at least 60contiguous amino residues, at least 70 contiguous amino acid residues,at least contiguous 80 amino acid residues, at least contiguous 90 aminoacid residues, at least contiguous 100 amino acid residues, at leastcontiguous 125 amino acid residues, at least 150 contiguous amino acidresidues, at least contiguous 175 amino acid residues, at leastcontiguous 200 amino acid residues, or at least contiguous 250 aminoacid residues of the amino acid sequence of another polypeptide. In aspecific embodiment, a fragment of a polypeptide retains at least onefunction of the polypeptide.

The term “antigen” refers to an entity or fragment thereof which canbind to an antibody. An immunogen refers to an antigen which can elicitan immune response in an organism, particularly an animal, moreparticularly a mammal including a human. The term antigen includesregions known as antigenic determinants or epitopes which refers to aportion of the antigen (which are contacted or which play a significantrole in supporting a contact reside in the antigen responsible forantigenicity or antigenic determinants.

As used herein, the term “soluble” means partially or completelydissolved in an aqueous solution.

Also as used herein, the term “immunogenic” refers to substances whichelicit the production of antibodies, T-cells and other reactive immunecells directed against an antigen of the immunogen.

An immune response occurs when an individual produces sufficientantibodies, T-cells and other reactive immune cells against administeredimmunogenic compositions of the present invention to moderate oralleviate the disorder to be treated.

The term immunogenicity as used herein refers to a measure of theability of an antigen to elicit an immune response (humoral or cellular)when administered to a recipient. The present invention is concernedwith approaches that reduce the immunogenicity of the subject humanchimeric or humanized antibodies.

Humanized antibody of reduced immunogenicity refers to a humanizedantibody exhibiting reduced immunogenicity relative to the parentantibody, e.g., the murine antibody.

Humanized antibody substantially retaining the binding properties of theparent antibody refers to a humanized antibody which retains the abilityto specifically bind the antigen recognized by the parent antibody usedto produce such humanized antibody. Preferably the humanized antibodywill exhibit the same or substantially the same antigen-binding affinityand avidity as the parent antibody. Ideally, the affinity of theantibody will not be less than 10% of the parent antibody affinity, morepreferably not less than about 30%, and most preferably the affinitywill not be less than 50% of the parent antibody. Methods for assayingantigen-binding affinity are well known in the art and includehalf-maximal binding assays, competition assays, and Scatchard analysis.Suitable antigen binding assays are described in this application.

A “back mutation” is a mutation introduced in a nucleotide sequencewhich encodes a humanized antibody, the mutation results in an aminoacid corresponding to an amino acid in the parent antibody (e.g., donorantibody, for example, a murine antibody). Certain framework residuesfrom the parent antibody may be retained during the humanization of theantibodies of the invention in order to substantially retain the bindingproperties of the parent antibody, while at the same time minimizing thepotential immunogenicity of the resultant antibody. In one embodiment ofthe invention, the parent antibody is of mouse origin. For example, theback mutation changes a human framework residue to a parent murineresidue. Examples of framework residues that may be back mutatedinclude, but are not limited to, canonical residues, interface packingresidues, unusual parent residues which are close to the binding site,residues in the “Vernier Zone” (which forms a platform on which the CDRsrest) (Foote & Winter, 1992, J. Mol. Biol. 224, 487-499), and thoseclose to CDR H3.

As used herein a “conservative change” refers to alterations that aresubstantially conformationally or antigenically neutral, producingminimal changes in the tertiary structure of the mutant polypeptides, orproducing minimal changes in the antigenic determinants of the mutantpolypeptides, respectively, as compared to the native protein. Whenreferring to the antibodies and antibody fragments of the invention, aconservative change means an amino acid substitution that does notrender the antibody incapable of binding to the subject receptor. Thoseof ordinary skill in the art will be able to predict which amino acidsubstitutions can be made while maintaining a high probability of beingconformationally and antigenically neutral. Such guidance is provided,for example in Berzofsky, (1985) Science 229:932-940 and Bowie et al.(1990) Science 247:1306-1310. Factors to be considered that affect theprobability of maintaining conformational and antigenic neutralityinclude, but are not limited to: (a) substitution of hydrophobic aminoacids is less likely to affect antigenicity because hydrophobic residuesare more likely to be located in a protein's interior; (b) substitutionof physiochemically similar, amino acids is less likely to affectconformation because the substituted amino acid structurally mimics thenative amino acid; and (c) alteration of evolutionarily conservedsequences is likely to adversely affect conformation as suchconservation suggests that the amino acid sequences may have functionalimportance. One of ordinary skill in the art will be able to assessalterations in protein conformation using well-known assays, such as,but not limited to microcomplement fixation methods (Wasserman et al.(1961) J. Immunol. 87:290-295; Levine et al. (1967) Meth. Enzymol.11:928-936) and through binding studies using conformation-dependentmonoclonal antibodies (Lewis et al. (1983) Biochem. 22:948-954).

Further, the term “therapeutically effective amount” refers to theamount of antibody which, when administered to a human or animal, whichis sufficient to result in a therapeutic effect in said human or animal.The effective amount is readily determined by one of skill in the artfollowing routine procedures.

As used herein, the terms “treat,” “prevent,” “preventing,” and“prevention” refer to the prevention of the recurrence or onset of oneor more symptoms of a disorder in a subject resulting from theadministration of a prophylactic or therapeutic agent.

Construction of Humanized Antibodies

The present invention may be understood more readily by reference to thefollowing detailed description of specific embodiments included herein.Although the present invention has been described with reference tospecific details of certain embodiments, thereof, it is not intendedthat such details should be regarded as limitations upon the scope ofthe invention.

The present invention provides novel methods and compositions comprisinghighly specific and highly effective antibodies having the ability tospecifically recognize and bind to specific epitopes from a range ofβ-amyloid antigens. The antibodies enabled by the teaching of thepresent invention are particularly useful for the treatment ofamyloidosis, a group of diseases and disorders associated with amyloidplaque formation including secondary amyloidosis and age-relatedamyloidosis including, but not limited to, neurological disorders suchas Alzheimer's Disease (AD), Lewy body dementia, Down's syndrome,hereditary cerebral hemorrhage with amyloidosis (Dutch type); the GuamParkinson-Dementia complex; as well as other diseases which are based onor associated with amyloid-like proteins such as progressivesupranuclear palsy, multiple sclerosis; Creutzfeld Jacob disease,hereditary cerebral hemorrhage with amyloidosis Dutch type, Parkinson'sdisease, HIV-related dementia, ALS (amyotropic lateral sclerosis), AdultOnset Diabetes; senile cardiac amyloidosis; endocrine tumors, andothers, including macular degeneration, to name just a few.

A fully humanized or reshaped variable region according to the presentinvention may be created within the scope of the invention by firstdesigning a variable region amino acid sequence that containsnon-human-, particularly rodent-derived CDRs, but especially CDRsderived from murine antibody ACI-01-Ab7C2 (named “mC2” throughout theapplication and deposited 1 Dec. 2005 with the “Deutsche Sammlung vonMikroorganismen and Zellkulturen GmbH (DSMZ) in Braunschweig,Mascheroder Weg 1 B, 38124 Branuschweig, under the provisions of theBudapest Treaty and given accession no DSM ACC2750) embedded inhuman-derived framework sequences. The non-human-, particularly therodent-derived CDRs, which may be obtained from the antibody accordingto the present invention, provide the desired specificity. Accordingly,these residues are to be included in the design of the reshaped variableregion essentially unchanged. Any modifications should thus berestricted to a minimum and closely watched for changes in thespecificity and affinity of the antibody. On the other hand, frameworkresidues in theory can be derived from any human variable region.

In order to create a reshaped antibody which shows an acceptable or aneven improved affinity, a human framework sequences should be chosen,which is equally suitable for creating a reshaped variable region andfor retaining antibody affinity.

In order to achieve this goal, the best-fit strategy was developed. Asit is known that the framework sequences serve to hold the CDRs in theircorrect spatial orientation for interaction with antigen, and thatframework residues can sometimes even participate in antigen binding,this strategy aims at minimizing changes that may negatively effect thethree-dimensional structure of the antibody by deriving the humanframework sequence used for antibody reshaping from the human variableregion that is most homologous or similar to the non-human-,particularly the rodent-derived variable region. This will also maximisethe likelihood that affinity will be retained in the reshaped antibody.

At its simplest level, the “best fit” strategy involves comparing thedonor rodent V-region with all known human V-region amino acidsequences, and then selecting the most homologous to provide theacceptor framework regions for the humanization exercises. In realitythere are several other factors which should be considered, and whichmay influence the final selection of acceptor framework regions.Molecular modelling predictions may be used in this regard prior to anyexperimental work in an attempt to maximise the affinity of theresultant reshaped antibody. Essentially, the goal of the modelling isto predict which key residues (if any) of the most homologous humanframework should be left as in the rodent to obtain the best affinity inthe reshaped antibody.

In one embodiment of the invention, the CDRs are obtainable from mousemonoclonal antibody, particularly from mouse monoclonal antibodyACI-01-Ab7C2 (named “mC2” throughout the application) described inco-pending application EP 05 02 7092.5 filed Dec. 12, 2005, thedisclosure of which is incorporated herein by reference.

Hybridoma cells FP-12H3-C2, producing mouse monoclonal antibodyACI-01-Ab7C2 (named “mC2” and hC2 for the humanized C2 antibody,throughout the application) were deposited 1 Dec. 2005 in co-pendingapplication no EP05027092.5 with the “Deutsche Sammlung vonMikroorganismen and Zellkulturen GmbH (DSMZ) in Braunschweig,Mascheroder Weg 1 B, 38124 Braunschweig, under the provisions of theBudapest Treaty and given accession no DSM ACC2750.

The mouse antibody may be raised against a supramolecular antigenicconstruct comprising an antigenic peptide corresponding to the aminoacid sequence of the β-amyloid peptide, particularly of β-amyloidpeptide Aβ₁₋₁₅, Aβ₁₋₁₆ and Aβ_(1-16(Δ14)), modified with a hydrophobicmoiety such as, for example, palmitic acid or a hydrophilic moiety suchas, for example, polyethylene glycol (PEG) or a combination of both,wherein the hydrophobic and hydrophilic moiety, respectively, iscovalently bound to each of the termini of the antigenic peptide throughat least one, particularly one or two amino acids such as, for example,lysine, glutamic acid and cysteine or any other suitable amino acid oramino acid analogue capable of serving as a connecting device forcoupling the hydrophobic and hydrophilic moiety to the peptide fragment.When a PEG is used as the hydrophilic moiety, the free PEG termini iscovalently bound to phosphatidylethanolamine or any other compoundsuitable to function as the anchoring element, for example, to embed theantigenic construct in the bilayer of a liposome.

In particular, a mouse antibody may be raised against a supramolecularantigenic construct comprising an antigenic peptide corresponding to theamino acid sequence of the β-amyloid peptide Aβ₁₋₁₆ modified with ahydrophilic moiety such as, for example, polyethylene glycol (PEG)hydrophilic moiety is covalently bound to each of the termini of theantigenic peptide through at least one, particularly one or two aminoacids such as, for example, lysine, glutamic acid and cysteine or anyother suitable amino acid or amino acid analogue capable of serving as aconnecting device for coupling the hydrophobic and hydrophilic moiety tothe peptide fragment. When a PEG is used as the hydrophilic moiety, thefree PEG termini are covalently bound to phosphatidylethanolamine or anyother compound suitable to function as the anchoring element, forexample, to embed the antigenic construct in the bilayer of a liposome.

In an embodiment of the invention, a chimeric antibody or a fragmentthereof, or a humanized antibody or a fragment thereof is provided whichcomprises in the variable region at least one CDR of non-human originembedded in one or more human- or primate-derived framework regions andcombined with a constant region derived from a human or primate sourceantibody, which chimeric antibody or a fragment thereof, or a humanizedantibody or a fragment thereof is capable of specifically recognizingand binding β-amyloid monomeric peptide.

The CDRs contain the residues most likely to bind antigen and must beretained in the reshaped antibody. CDRs are defined by sequenceaccording to Kabat et al., Sequence of Proteins of ImmunologicalInterest, 5^(th) Edition, The United States Department of Health andHuman Services, The United States Government Printing Office, 1991. CDRsfall into canonical classes (Chothia et al, 1989 Nature, 342, 877-883)where key residues determine to a large extent the structuralconformation of the CDR loop. These residues are almost always retainedin the reshaped antibody.

In the process for preparing a humanized antibody according to theinvention, the amino acid sequences of the C2 heavy chain and lightchain variable regions (V_(H) and V_(K)) are compared to rodent antibodyV_(H) and V_(K) sequences in the NCBI and Kabat databases.

The closest match mouse germ line gene to C2 V_(K) is bb1, LocusMMU231201, (Schable et al, 1999). A comparison reveals that two aminoacids differ from this germ line sequence, both located within CDRL1.Mature murine antibodies with similar, but not identical, sequence canbe found. Several have an identical CDRL2 and identical CDRL3, but theCDRL1 of C2 seems to be unique. Comparison with human germ line V_(K)sequences shows that genes from subgroup V_(K)II are the best match forC2 V_(K) (Cox et al, 1994). C2 V_(K) can thus be assigned to Kabatsubgroup MuV_(K)II.Sequence.

DPK15 together with the human J region HuJ_(K)1 may be selected toprovide the acceptor framework sequences for the humanized V_(K).

The residues at the interface between the variable light and heavychains have been defined (Chothia et al, 1985 J. Mol. Biol., 186,651-663). These are usually retained in the reshaped antibody. The Pheat position 87 of mouse C2 V_(K) is unusual at the interface, where aTyr is more common in the V_(K)II subgroup, indicating that thisframework residue may be important for antibody activity. Tyr 87 ispresent in the human germline and humanized C2VK.

The humanized V_(K) sequences thus may be designed such that the C2HuVK1consists of mouse C2 V_(K) CDRs with frameworks from DPK 15 and humanJ_(K)1. In a specific embodiment of the invention, murine residues maybe substituted in the human framework region at positions 45, and/or 87.In the CDR2 region obtainable from a mouse monoclonal antibody,particularly murine antibody ACI-01-Ab7C2, amino acid substitutions maybe made at Kabat positions 50 and/or 53. Residue 45 may be involved insupporting the conformation of the CDRs. Residue 87 is located at theinterface of the V_(H) and V_(K) domains. Therefore these residues maybe critical for maintenance of antibody binding.

The closest match mouse germ line gene to C2 V_(H) AF is VH7183, LocusAF120466, (Langdon et al, 2000). Comparison with human germ line V_(H)sequences shows that genes from subgroup V_(H)III are the best match forC2 V_(H). C2 V_(H) AF can be assigned to Kabat subgroup MuV_(H)IIID.Sequence DP54 together with the human J region HuJ_(H)6 can be selectedto provide the acceptor framework sequences for the humanized V_(H).

The comparison shows that there are nine amino acid differences betweenthe C2 VH sequences and the human acceptor germ line sequence DP54 andJ_(H)6, most being located within CDRH2. Mature murine antibodies withidentical or similar (one residue different) CDRH1 or with similar CDRH2(one residue different) are found, but none with all three CDRsidentical to C2 V_(H) AF. CDRH3 of C2 antibody is unusually short,consisting of only three residues. However, other antibodies are foundin the database with CDRH3 of this length. Residue 47 of C2 V_(H) is Leurather than the more common Trp, and residue 94 is Ser rather than thenormal Arg, indicating that these framework residues may be importantfor antibody activity.

Various humanized V_(H) sequences may be designed. C2HuVH1 consists ofC2 V_(H) AF CDRs with frameworks from DP54 and HuJ_(H)6. In a specificembodiment of the invention, murine residues may be substituted in thehuman framework region at positions 47 or 94 or both. Residue 47 inframework 2 makes contact both with the CDRs and with the V_(K) domain.Residue 94 may be involved in supporting the conformation of the CDRs.Therefore these residues may be critical for maintenance of antibodybinding.

Different HCVR and LCVR regions may be designed which comprise thenon-human CDRs obtainable from the donor antibody, for example, a murineantibody, embedded into the native or modified human- or primate-derivedframework regions. The modification may particularly concern an exchangeof one or more amino acid residues within the framework region bynon-human residues, particularly murine residues, more commonly found inthis position in the respective subgroups or by residues which havesimilar properties to the ones more commonly found in this position inthe respective subgroups.

The modification of the framework region the framework sequences serveto hold the CDRs in their correct spatial orientation for interactionwith antigen, and that framework residues can sometimes even participatein antigen binding. In one embodiment of the invention measures aretaken to further adapt the selected human framework sequences to makethem most similar to the sequences of the rodent frameworks in order tomaximise the likelihood that affinity will be retained in the reshapedantibody.

Accordingly, murine residues in the human framework region may besubstituted. In particular, murine residues may be substituted in thehuman framework region of the Heavy Chain Variable (HCVR) region atpositions 47 or 94 or both and in the human framework region of theLight Chain Variable (LCVR) region at positions 45 and/or 87. In theCDR2 region obtainable from a mouse monoclonal antibody, particularlymurine antibody ACI-01-Ab7C2, amino acid substitutions may be made atKabat positions 50 and/or 53.

The residues found in the above indicated positions in the humanframework region may be exchanged by murine residues more commonly foundin this position in the respective subgroups. In particular, the Trp inKabat position 47 in the human- or primate-derived framework region ofthe Heavy Chain Variable Region as shown in SEQ ID NO: 15 may bereplaced by an Leu or by an amino acid residue that has similarproperties and the substitution of which leads to alterations that aresubstantially conformationally or antigenically neutral, producingminimal changes in the tertiary structure of the mutant polypeptides, orproducing minimal changes in the antigenic determinants. In particular,the Trp in Kabat position 47 in the human- or primate-derived frameworkregion of the Heavy Chain Variable Region as shown in SEQ ID NO: 15 mayfurther be replaced by an amino acid selected from the group consistingof norleucine, Ile, Val, Met, Ala, and Phe, particularly by Ile.Alternative conservative substitutions may be contemplated which areconformationally and antigenically neutral.

The Arg in Kabat position 94 in the human- or primate-derived frameworkregion of the Heavy Chain Variable Region as shown in SEQ ID NO: 15 maybe replaced by Ser or by an amino acid residue that has similarproperties and the substitution of which leads to alterations that aresubstantially conformationally or antigenically neutral, producingminimal changes in the tertiary structure of the mutant polypeptides, orproducing minimal changes in the antigenic determinants. In particular,the Arg in Kabat position 94 in the human- or primate-derived frameworkregion of the Heavy Chain Variable Region as shown in SEQ ID NO: 15 mayalternatively be replaced by Thr.

In another embodiment of the invention, both residues may be replaced inthe humanized antibody.

The Gln in Kabat position 45 in the human- or primate-derived frameworkregion of the Light Chain Variable Region as shown in SEQ ID NO: 12 maybe replaced by Lys or by an amino acid residue that has similarproperties and the substitution of which leads to alterations that aresubstantially conformationally or antigenically neutral, producingminimal changes in the tertiary structure of the mutant polypeptides, orproducing minimal changes in the antigenic determinants. In particular,the Gln in Kabat position 45 in the human- or primate-derived frameworkregion of the Light Chain Variable Region as shown in SEQ ID NO: 12 maybe replaced by an amino acid selected from the group consisting of Arg,Gln, and Asn, particularly by Arg.

The Leu in Kabat position 50 in the human- or primate-derived frameworkregion of the Light Chain Variable Region as shown in SEQ ID NO: 12 maybe replaced by Lys or by an amino acid residue that has similarproperties and the substitution of which leads to alterations that aresubstantially conformationally or antigenically neutral, producingminimal changes in the tertiary structure of the mutant polypeptides, orproducing minimal changes in the antigenic determinants. In particular,the Leu in Kabat position 50 in the human- or primate-derived frameworkregion of the Light Chain Variable Region as shown in SEQ ID NO: 12 maybe replaced by an amino acid selected from the group consisting of Arg,Gln, and Asn, particularly by Arg.

The Asn in Kabat position 53 in the human- or primate-derived frameworkregion of the Light Chain Variable Region as shown in SEQ ID NO: 12 maybe replaced by His and Gln or by an amino acid residue that has similarproperties and the substitution of which leads to alterations that aresubstantially conformationally or antigenically neutral, producingminimal changes in the tertiary structure of the mutant polypeptides, orproducing minimal changes in the antigenic determinants. In particular,the Asn in Kabat position 53 in the human- or primate-derived frameworkregion of the Light Chain Variable Region as shown in SEQ ID NO: 12 maybe replaced by an amino acid selected from the group consisting of Gln,His, Lys and Arg.

The Thr in Kabat position 87 in the human- or primate-derived frameworkregion of the Light Chain Variable Region as shown in SEQ ID NO: 12 maybe replaced by Phe or by an amino acid residue that has similarproperties and the substitution of which leads to alterations that aresubstantially conformationally or antigenically neutral, producingminimal changes in the tertiary structure of the mutant polypeptides, orproducing minimal changes in the antigenic determinants. In particular,the Tyr in Kabat position 87 in the human- or primate-derived frameworkregion of the Light Chain Variable Region as shown in SEQ ID NO: 12 maybe replaced by an amino acid selected from the group consisting of Leu,Val, Ile, and Ala, particularly by Leu.

The so obtained variable region comprising at least one CDR of non-humanorigin embedded in one or more human- or primate-derived frameworkregions may then be combined with a constant region derived from a humanor primate source antibody, particularly with human IgG4 or κ constantregions respectively. The IgG4 constant region may be modified by, forexample, changing Serine at position 228 in the hinge region to Proline(HuIgG4 Ser-Pro). This mutation stabilizes the interchain disulphidebond and prevents the formation of half molecules that may occur innative human IgG4 preparations. The IgG4 constant region may be furthermodified by deletion of the terminal Lys in position 439 as shown in SEQID NO: 16.

The modified variable regions may be constructed by method known in theart such as, for example overlapping PCR recombination. The expressioncassettes for the chimeric antibody, C2 ChV_(H) AF and C2 ChV_(K), maybe used as templates for mutagenesis of the framework regions to therequired sequences. Sets of mutagenic primer pairs are synthesizedencompassing the regions to be altered. The humanized V_(H) and V_(K)expression cassettes produced may be cloned into appropriate cloningvectors know in the art such as, for example, pUC19. After the entireDNA sequence is confirmed to be correct for each V_(H) and V_(K), themodified heavy and light chain V-region genes can be excised from thecloning vector as expression cassettes. These can then be transferred toappropriate expression vectors such as pSVgpt and pSVhyg which includehuman IgG4 Ser-Pro or x constant regions respectively.

Expression Vectors

Expression vector pSVgpt is based on pSV₂gpt (Mulligan and Berg, 1980)and includes the ampicillin resistance gene for selection in bacterialcells, the gpt gene for selection in mammalian cells, the murine heavychain immunoglobulin enhancer region, genomic sequence encoding theconstant region gene and SV40 poly A sequences. The heavy chain variableregion for expression is inserted as a HindIII to BamHI fragment.

Expression vector pSVhyg includes the ampicillin resistance gene forselection in bacterial cells, the hyg gene for selection in mammaliancells, the murine heavy chain immunoglobulin enhancer region, genomicsequence encoding the kappa constant region gene and including the kappaenhancer and SV40 poly A sequences. The light chain variable region forexpression is inserted as a HindIII to BamHI fragment.

The DNA sequence is then to be confirmed to be correct for the humanizedV_(H) and V_(K) in the expression vectors.

For antibody production the humanized heavy and light chain expressionvectors may be introduced into appropriate production cell lines know inthe art such as, for example, NS0 cells. Introduction of the expressionvectors may be accomplished by co-transfection via electroporation orany other suitable transformation technology available in the art.Antibody producing cell lines can then be selected and expanded andhumanized antibodies purified. The purified antibodies can then beanalyzed by standard techniques such as SDS-PAGE.

Antibody with Improved Affinity, Specificity, Stability

The CDRL2 sequence (“KVSNRFS”) of the mouse C2 antibody may be modifiedslightly without adversely affecting antibody activity. Conservativesubstitutions may be made through exchange of R for K at position 50 andS for N at position 53. The two alternative CDRL2 sequences aretherefore “RVSNRFS” and “KVSSRFS”, respectively. These are incorporatedinto the murine V_(K) sequence with no other changes, as C2 VK-R and C2VK-S, respectively.

The affinity, specificity and stability of an antibody according to theinvention as described herein before or a fragment thereof can bemodified by change of its glycosylation profile or pattern resulting inimproved therapeutic values.

To achieve this change in glycosylation pattern, host cells may beengineered such that they are capable of expressing a preferred range ofa glycoprotein-modifying glycosyl transferase activity which increasescomplex N-linked oligosaccharides carrying bisecting GlcNAc. Further,modified glycoforms of glycoproteins may be obtained, for exampleantibodies, including whole antibody molecules, antibody fragments, orfusion proteins that include a region equivalent to the Fc region of animmunoglobulin, having an enhanced Fc-mediated cellular cytotoxicity.

Methods of obtaining antibodies with modified glycosylation pattern areknown to those skilled in the art and described, for example, inEP1071700, US2005272128, Ferrara et al (2006) J Biol Chem 281(8),5032-5036); Ferrara et al (2006) Biotechnology and Bioengineering 93(5),851-861.

Pharmaceutical Preparation and Administration

The antibodies according to the invention, but particularly a monoclonalantibody according the invention, can be prepared in a physiologicallyacceptable formulation and may comprise a pharmaceutically acceptablecarrier, diluent and/or excipient using known techniques. For example,the antibody according to the invention and as described herein beforeincluding any functionally equivalent antibody or functional partsthereof, in particular, the monoclonal antibody including anyfunctionally equivalent antibody or functional parts thereof is combinedwith a pharmaceutically acceptable carrier, diluent and/or excipient toform a therapeutic composition. Suitable pharmaceutical carriers,diluents and/or excipients are well known in the art and include, forexample, phosphate buffered saline solutions, water, emulsions such asoil/water emulsions, various types of wetting agents, sterile solutions,etc.

Formulation of the pharmaceutical composition according to the inventioncan be accomplished according to standard methodology know to thoseskilled in the art.

The compositions of the present invention may be administered to asubject in the form of a solid, liquid or aerosol at a suitable,pharmaceutically effective dose. Examples of solid compositions includepills, creams, and implantable dosage units. Pills may be administeredorally. Therapeutic creams may be administered topically. Implantabledosage units may be administered locally, for example, at a tumor site,or may be implanted for systematic release of the therapeuticcomposition, for example, subcutaneously. Examples of liquidcompositions include formulations adapted for injection intramuscularly,subcutaneously, intravenously, intra-arterially, and formulations fortopical and intraocular administration. Examples of aerosol formulationsinclude inhaler formulations for administration to the lungs.

The compositions may be administered by standard routes ofadministration. In general, the composition may be administered bytopical, oral, rectal, nasal, interdermal, intraperitoneal, orparenteral (for example, intravenous, subcutaneous, or intramuscular)routes. In addition, the composition may be incorporated into sustainedrelease matrices such as biodegradable polymers, the polymers beingimplanted in the vicinity of where delivery is desired, for example, atthe site of a tumor. The method includes administration of a singledose, administration of repeated doses at predetermined time intervals,and sustained administration for a predetermined period of time.

A sustained release matrix, as used herein, is a matrix made ofmaterials, usually polymers which are degradable by enzymatic oracid/base hydrolysis or by dissolution. Once inserted into the body, thematrix is acted upon by enzymes and body fluids. The sustained releasematrix desirably is chosen by biocompatible materials such as liposomes,polylactides (polylactide acid), polyglycolide (polymer of glycolicacid), polylactide co-glycolide (copolymers of lactic acid and glycolicacid), polyanhydrides, poly(ortho)esters, polypeptides, hyaluronic acid,collagen, chondroitin sulfate, carboxylic acids, fatty acids,phospholipids, polysaccharides, nucleic acids, polyamino acids, aminoacids such phenylalanine, tyrosine, isoleucine, polynucleotides,polyvinyl propylene, polyvinylpyrrolidone and silicone. A preferredbiodegradable matrix is a matrix of one of either polylactide,polyglycolide, or polylactide co-glycolide (co-polymers of lactic acidand glycolic acid).

It is well know to those skilled in the pertinent art that the dosage ofthe composition will depend on various factors such as, for example, thecondition of being treated, the particular composition used, and otherclinical factors such as weight, size, sex and general health conditionof the patient, body surface area, the particular compound orcomposition to be administered, other drugs being administeredconcurrently, and the route of administration.

The composition may be administered in combination with othercompositions comprising an biologically active substance or compound,particularly at least one compound selected from the group consisting ofcompounds against oxidative stress, anti-apoptotic compounds, metalchelators, inhibitors of DNA repair such as pirenzepin and metabolites,3-amino- 1-propanesulfonic acid (3APS), 1,3-propanedisulfonate (1,3PDS),α-secretase activators, β- and γ-secretase inhibitors, tau proteins,neurotransmitter, β-sheet breakers, attractants for amyloid betaclearing/depleting cellular components, inhibitors of N-terminaltruncated amyloid beta including pyroglutamated amyloid beta 3-42,anti-inflammatory molecules, “atypical antipsychotics” such as, forexample clozapine, ziprasidone, risperidone, aripiprazole or olanzapineor cholinesterase inhibitors (ChEIs) such as tacrine, rivastigmine,donepezil, and/or galantamine, M1 agonists and other drugs including anyamyloid or tau modifying drug and nutritive supplements such as, forexample, vitamin B12, cysteine, a precursor of acetylcholine, lecithin,choline, Ginkgo biloba, acyetyl-L-carnitine, idebenone, propentofylline,or a xanthine derivative, together with an antibody according to thepresent invention and, optionally, a pharmaceutically acceptable carrierand/or a diluent and/or an excipient and procedures for the treatment ofdiseases.

Proteinaceous pharmaceutically active matter may be present in amountsbetween 1 ng and 10 mg per dose. Generally, the regime of administrationshould be in the range of between 0.1 μg and 10 mg of the antibodyaccording to the invention, particularly in a range 1.0 μg to 1.0 mg,and more particularly in a range of between 1.0 μg and 100 μg, with allindividual numbers falling within these ranges also being part of theinvention. If the administration occurs through continuous infusion amore proper dosage may be in the range of between 0.01 μg and 10 mgunits per kilogram of body weight per hour with all individual numbersfalling within these ranges also being part of the invention.

Administration will generally be parenterally, eg intravenously.Preparations for parenteral administration include sterile aqueous ornon-aqueous solutions, suspensions and emulsions. Non-aqueous solventsinclude without being limited to it, propylene glycol, polyethyleneglycol, vegetable oil such as olive oil, and injectable organic esterssuch as ethyl oleate. Aqueous solvents may be chosen from the groupconsisting of water, alcohol/aqueous solutions, emulsions or suspensionsincluding saline and buffered media. Parenteral vehicles include sodiumchloride solution, Ringer's dextrose, dextrose and sodium chloride,lactated Ringer's, or fixed oils. Intravenous vehicles include fluid andnutrient replenishers, electrolyte replenishers (such as those based onRinger's dextrose) and others. Preservatives may also be present suchas, for example, antimicrobials, anti-oxidants, chelating agents, inertgases, etc.

The pharmaceutical composition may further comprise proteinaceouscarriers such as, for example, serum albumin or immunoglobulin,particularly of human origin. Further biologically active agents may bepresent in the pharmaceutical composition of the invention dependent onits the intended use.

When the binding target is located in the brain, certain embodiments ofthe invention provide for the antibody or active fragment thereof totraverse the blood-brain barrier. Certain neurodegenerative diseases areassociated with an increase in permeability of the blood-brain barrier,such that the antibody or active fragment thereof can be readilyintroduced to the brain. When the blood-brain barrier remains intact,several art-known approaches exist for transporting molecules across it,including, but not limited to, physical methods, lipid-based methods,and receptor and channel-based methods.

Physical methods of transporting the antibody or active fragment thereofacross the blood-brain barrier include, but are not limited to,circumventing the blood-brain barrier entirely, or by creating openingsin the blood-brain barrier. Circumvention methods include, but are notlimited to, direct injection into the brain (see, e.g., Papanastassiouet al., Gene Therapy 9: 398-406 (2002)) and implanting a delivery devicein the brain (see, e.g., Gill et al., Nature Med. 9: 589-595 (2003); andGliadel Wafers™, Guildford Pharmaceutical). Methods of creating openingsin the barrier include, but are not limited to, ultrasound (see, e.g.,U.S. Patent Publication No. 2002/0038086), osmotic pressure (e.g., byadministration of hypertonic mannitol (Neuwelt, E. A., Implication ofthe Blood-Brain Barrier and its Manipulation, Vols 1 & 2, Plenum Press,N.Y. (1989))), permeabilization by, e.g., bradykinin or permeabilizerA-7 (see, e.g., U.S. Pat. Nos. 5,112,596, 5,268,164, 5,506,206, and5,686,416), and transfection of neurons that straddle the blood-brainbarrier with vectors containing genes encoding the antibody orantigen-binding fragment (see, e.g., U.S. Patent Publication No.2003/0083299).

Lipid-based methods of transporting the antibody or active fragmentthereof across the blood-brain barrier include, but are not limited to,encapsulating the antibody or active fragment thereof in liposomes thatare coupled to antibody binding fragments that bind to receptors on thevascular endothelium of the blood-brain barrier (see, e.g., U.S. PatentApplication Publication No. 20020025313), and coating the antibody oractive fragment thereof in low-density lipoprotein particles (see, e.g.,U.S. Patent Application Publication No. 20040204354) or apolipoprotein E(see, e.g., U.S. Patent Application Publication No. 20040131692).

Receptor and channel-based methods of transporting the antibody oractive fragment thereof across the blood-brain barrier include, but arenot limited to, using glucocorticoid blockers to increase permeabilityof the blood-brain barrier (see, e.g., U.S. Patent ApplicationPublication Nos. 2002/0065259, 2003/0162695, and 2005/0124533);activating potassium channels (see, e.g., U.S. Patent ApplicationPublication No. 2005/0089473), inhibiting ABC drug transporters (see,e.g., U.S. Patent Application Publication No. 2003/0073713); coatingantibodies with a transferrin and modulating activity of the one or moretransferrin receptors (see, e.g., U.S. Patent Application PublicationNo. 2003/0129186), and cationizing the antibodies (see, e.g., U.S. Pat.No. 5,004,697).

Detection/Diagnosis

In a further embodiment the present invention provides methods and kitsfor the detection and diagnosis of amyloid-associated diseases orconditions. These methods include known immunological methods commonlyused for detecting or quantifying substances in biological samples or inan in situ condition.

Diagnosis of an amyloid-associated disease or condition in a patient maybe achieved by detecting the immunospecific binding of a monoclonalantibody or an active fragment thereof to an epitope of the amyloidprotein in a sample or in situ, which includes bringing the sample or aspecific body part or body area suspected to contain the amyloid proteininto contact with an antibody which binds an epitope of the amyloidprotein, allowing the antibody to bind to the amyloid protein to form animmunological complex, detecting the formation of the immunologicalcomplex and correlating the presence or absence of the immunologicalcomplex with the presence or absence of amyloid protein in the sample orspecific body part or area optionally comparing the amount of saidimmunological complex to a normal control value, wherein an increase inthe amount of said aggregate compared to a normal control valueindicates that said patient is suffering from or is at risk ofdeveloping an amyloid-associated disease or condition.

Monitoring minimal residual disease in a patient following treatmentwith an antibody or a vaccine composition according to the invention maybe achieved by detecting the immunospecific binding of a monoclonalantibody or an active fragment thereof to an epitope of the amyloidprotein in a sample or in situ, which includes bringing the sample or aspecific body part or body area suspected to contain the amyloid antigeninto contact with an antibody which binds an epitope of the amyloidprotein, allowing the antibody to bind to the amyloid antigen to form animmunological complex, detecting the formation of the immunologicalcomplex and correlating the presence or absence of the immunologicalcomplex with the presence or absence of amyloid antigen in the sample orspecific body part or area, optionally comparing the amount of saidimmunological complex to a normal control value, wherein an increase inthe amount of said aggregate compared to a normal control valueindicates that said patient may still suffer from a minimal residualdisease.

Predicting responsiveness of a patient to a treatment with a vaccinecomposition according to the invention may be achieved by detecting theimmunospecific binding of a monoclonal antibody or an active fragmentthereof to an epitope of the amyloid protein in a sample or in situ,which includes bringing the sample or a specific body part or body areasuspected to contain the amyloid antigen into contact with an antibodywhich binds an epitope of the amyloid protein, allowing the antibody tobind to the amyloid antigen to form an immunological complex, detectingthe formation of the immunological complex and correlating the presenceor absence of the immunological complex with the presence or absence ofamyloid antigen in the sample or specific body part or area, optionallycomparing the amount of said immunological complex before and afteronset of the treatment, wherein an decrease in the amount of saidaggregate indicates that said patient has a high potential of beingresponsive to the treatment.

Biological samples that may be used in the diagnosis of anamyloid-associated disease or condition are, for example, fluids such asserum, plasma, saliva, gastric secretions, mucus, cerebrospinal fluid,lymphatic fluid and the like or tissue or cell samples obtained from anorganism such as neural, brain, cardiac or vascular tissue. Fordetermining the presence or absence of the amyloid protein in a sampleany immunoassay known to those of ordinary skill in the art. (See Harlowand Lane, Antibodies: A Laboratory Manual (Cold Spring HarborLaboratory, New York 1988 555-612) may be used such as, for example,assays which utilize indirect detection methods using secondary reagentsfor detection, ELISA's and immunoprecipitation and agglutination assays.A detailed description of these assays is, for example, given inWO96/13590 to Maertens and Stuyver, Zrein et al. (1998) and WO96/29605.

For in situ diagnosis, the antibody or any active and functional partthereof may be administered to the organism to be diagnosed by methodsknown in the art such as, for example, intravenous, intranasal,intraperitoneal, intracerebral, intraarterial injection such that aspecific binding between the antibody according to the invention with aneptitopic region on the amyloid protein may occur. The antibody/antigencomplex may be detected through a label attached to the antibody or afunctional fragment thereof.

The immunoassays used in diagnostic applications typically rely onlabelled antigens, antibodies, or secondary reagents for detection.These proteins or reagents can be labelled with compounds generallyknown to those skilled in the art including enzymes, radioisotopes, andfluorescent, luminescent and chromogenic substances including coloredparticles, such as colloidal gold and latex beads. Of these, radioactivelabelling can be used for almost all types of assays and with mostvariations. Enzyme-conjugated labels are particularly useful whenradioactivity must be avoided or when quick results are needed.Fluorochromes, although requiring expensive equipment for their use,provide a very sensitive method of detection. Antibodies useful in theseassays include monoclonal antibodies, polyclonal antibodies, andaffinity purified polyclonal antibodies.

Alternatively, the antibody may be labelled indirectly by reaction withlabelled substances that have an affinity for immunoglobulin, such asprotein A or G or second antibodies. The antibody may be conjugated witha second substance and detected with a labelled third substance havingan affinity for the second substance conjugated to the antibody. Forexample, the antibody may be conjugated to biotin and theantibody-biotin conjugate detected using labelled avidin orstreptavidin. Similarly, the antibody may be conjugated to a hapten andthe antibody-hapten conjugate detected using labelled anti-haptenantibody.

Those of ordinary skill in the art will know of these and other suitablelabels which may be employed in accordance with the present invention.The binding of these labels to antibodies or fragments thereof can beaccomplished using standard techniques commonly known to those ofordinary skill in the art. Typical techniques are described by Kennedy,J. H., et al., 1976 (Clin. Chim. Acta 70:1-31), and Schurs, A. H. W. M.,et al. 1977 (Clin. Chim Acta 81:1-40). Coupling techniques mentioned inthe latter are the glutaraldehyde method, the periodate method, thedimaleimide method, and others, all of which are incorporated byreference herein.

Current immunoassays utilize a double antibody method for detecting thepresence of an analyte, wherein. The antibody is labeled indirectly byreactivity with a second antibody that has been labeled with adetectable label. The second antibody is preferably one that binds toantibodies of the animal from which the monoclonal antibody is derived.In other words, if the monoclonal antibody is a mouse antibody, then thelabeled, second antibody is an anti-mouse antibody. For the monoclonalantibody to be used in the assay described below, this label ispreferably an antibody-coated bead, particularly a magnetic bead. Forthe polyclonal antibody to be employed in the immunoassay describedherein, the label is preferably a detectable molecule such as aradioactive, fluorescent or an electrochemiluminescent substance.

An alternative double antibody system often referred to as fast formatsystems because they are adapted to rapid determinations of the presenceof an analyte, may also be employed within the scope of the presentinvention. The system requires high affinity between the antibody andthe analyte. According to one embodiment of the present invention, thepresence of the amyloid protein is determined using a pair ofantibodies, each specific for amyloid protein. One of said pairs ofantibodies is referred to herein as a “detector antibody” and the otherof said pair of antibodies is referred to herein as a “captureantibody”. The monoclonal antibody of the present invention can be usedas either a capture antibody or a detector antibody. The monoclonalantibody of the present invention can also be used as both capture anddetector antibody, together in a single assay. One embodiment of thepresent invention thus uses the double antibody sandwich method fordetecting amyloid protein in a sample of biological fluid. In thismethod, the analyte (amyloid protein) is sandwiched between the detectorantibody and the capture antibody, the capture antibody beingirreversibly immobilized onto a solid support. The detector antibodywould contain a detectable label, in order to identify the presence ofthe antibody-analyte sandwich and thus the presence of the analyte.

Exemplary solid phase substances include, but are not limited to,microtiter plates, test tubes of polystyrene, magnetic, plastic or glassbeads and slides which are well known in the field of radioimmunoassayand enzyme immunoassay. Methods for coupling antibodies to solid phasesare also well known to those skilled in the art. More recently, a numberof porous material such as nylon, nitrocellulose, cellulose acetate,glass fibers and other porous polymers have been employed as solidsupports.

The present invention also relates to a diagnostic kit for detectingamyloid protein in a biological sample comprising a composition asdefined above. Moreover, the present invention relates to the latterdiagnostic kit which, in addition to a composition as defined above,also comprises a detection reagent as defined above. The term“diagnostic kit” refers in general to any diagnostic kit known in theart. More specifically, the latter term refers to a diagnostic kit asdescribed in Zrein et al. (1998).

It is still another object of the present invention to provide novelimmunoprobes and test kits for detection and diagnosis ofamyloid-associated diseases and conditions comprising antibodiesaccording to the present invention. For immunoprobes, the antibodies aredirectly or indirectly attached to a suitable reporter molecule, e.g.,an enzyme or a radionuclide. The test kit includes a container holdingone or more antibodies according to the present invention andinstructions for using the antibodies for the purpose of binding toamyloid protein to form an immunological complex and detecting theformation of the immunological complex such that presence or absence ofthe immunological complex correlates with presence or absence of amyloidprotein.

EXAMPLES Materials

The development and preparation of mouse monoclonal antibodyACI-01-Ab7C2 (named “mC2” and hC2 for the humanized C2 antibody,throughout the application) is described in co-pending application EP 0502 7092.5 filed Dec. 12, 2005, the disclosure of which is incorporatedherein by reference.

Hybridoma cells FP-12H3-C2, producing mouse monoclonal antibodyACI-01-Ab7C2 (named “mC2” and hC2 for the humanized C2 antibody,throughout the application) were deposited 1 Dec. 2005 in co-pendingapplication no EP05027092.5 with the “Deutsche Sammlung vonMikroorganismen and Zellkulturen GmbH (DSMZ) in Braunschweig,Mascheroder Weg 1 B, 38124 Braunschweig, under the provisions of theBudapest Treaty and given accession no DSM ACC2750.

Hybridoma cells were cultured in Dulbecco's modified Eagle Medium (DMEM)supplemented with 10% foetal bovine serum and antibiotics(Penicillin/Streptomycin). The isotype of the antibody produced waschecked and found to be mouse IgG2b/kappa, as expected.

Assay

An ELISA for binding to Amyloid Beta provided a reliable measure of thepotency of C2 antibodies. Positive control antibodies, murine FP-12H3-C2antibody (Genovac Lot No: AK379/01), and standard Chemicon antibody 1560(Lot no: 0508008791).

Choice of Human Constant Regions

As immune system recruitment is not desirable for the clinical antibodycandidate, the selected human constant region for the heavy chain washuman IgG4, modified to change Serine at position 228 in the hingeregion to Proline (HuIgG4 Ser-Pro). This mutation stabilizes theinterchain disulphide bond and prevents the formation of half moleculesthat may occur in native human IgG4 preparations. The antibody expressedfrom the production cell lines will also have the terminal lysineremoved. The sequences of human constant regions HuIgG4 Ser-Pro andhuman Kappa are given in SEQ ID NO: 17 and 14, respectively.

Example 1 Cloning and Sequencing of Antibody Variable Regions

Total RNA was prepared from 3×10⁶ hybridoma cells (one T175 flask) usingthe Qiagen RNeasy mini kit (Cat No: 74104). RNA was eluted in 50 μLwater and checked on a 1.2% agarose gel. The conditioned medium from thecells was retained and a sample used for testing in the antibodyactivity assay.

V_(H) and V_(K) cDNAs were prepared using reverse transcriptase withmouse IgG and ic constant region primers. The first strand cDNAs wereamplified by PCR using a large set of signal sequence primers. Theamplified DNAs were gel-purified and cloned into the vector pGem® T Easy(Promega). The V_(H) and V_(K) clones obtained were screened for insertsof the expected size by PCR and the DNA sequence of selected clonesdetermined by automated DNA sequencing. The locations of thecomplementarity determining regions (CDRs) in the sequences weredetermined with reference to other antibody sequences (Kabat E A et al.,1991). The numbering convention of Kabat for antibody variable regionsis used throughout this application; hence residue numbers may differfrom the strict linear number.

The DNA sequence and deduced amino acid sequence for mC2 V_(K) is shownin SEQ ID NO: 29 and 27, respectively. Four clones gave this identicalproductive sequence. A non-productive aberrant V_(K) sequence thatarises from the hybridoma fusion partner was also found in a number ofclones.

For mC2 V_(H), two different productive sequences were isolated. The mC2V_(H) AF sequence (see SEQ ID NO: 30) was found in a total of 29 clones,with 14 single base pair changes in individual clones. The mC2 V_(H) Bsequence was found in a total of 8 clones. Five of these represented themajority sequence, with the other 3 clones being variations on this. Itis possible that these similar V_(H) B sequences arose as an artifact ofthe PCR amplification. A non-productive aberrant V_(H) was also obtainedfrom the C2 hybridoma and is attributed to defective V-D-J joining.

In order to determine which is the correct active mC2 V_(H), twochimeric antibodies were prepared with the two different V_(H)sequences, AF and B, combined with the mC2 V_(K), to be tested for thecorrect antibody activity.

Example 2 Construction of Chimeric Antibody Genes

A human chimeric antibody in its most common form consists of humanconstant regions linked to murine (or other non-human) variable regions.A chimeric antibody provides a very useful tool, firstly forconfirmation that the correct variable regions have been identified,secondly for use as a control antibody in antigen binding assays withthe same effector functions and utilizing the same secondary detectionreagents as a humanized or engineered antibody, and also may be used toinvestigate the pharmacokinetic and other properties of the humanconstant regions with reference to the particular target for theantibody.

Two chimeric heavy chain expression vectors were constructed consistingof mC2 V_(H) AF or mC2 V_(H) B variable regions linked to HuIgG4(Ser-Pro) constant region in the expression vector pSVgpt. This is basedon pSV₂gpt (Mulligan and Berg, 1980) and includes the ampicillinresistance gene for selection in bacterial cells, the gpt gene forselection in mammalian cells, the murine heavy chain immunoglobulinenhancer region, genomic sequence encoding the constant region gene andSV40 poly A sequences. The heavy chain variable region for expression isinserted as a HindIII to BamHI fragment.

A chimeric light chain vector was constructed consisting of C2 VK linkedto human C Kappa constant region in the expression vector pSVhyg.(Hieter P A et al, 1980) pSVhyg includes the ampicillin resistance genefor selection in bacterial cells, the hyg gene for selection inmammalian cells, the murine heavy chain immunoglobulin enhancer region,genomic sequence encoding the kappa constant region gene and includingthe kappa enhancer and SV40 poly A sequences. The light chain variableregion for expression is inserted as a HindIII to BamHI fragment.

Expression cassettes for the murine C2 VH and VK sequences wereconstructed by addition of 5′ flanking sequence including the leadersignal peptide, leader intron and the murine immunoglobulin promoter,and 3′ flanking sequence including the splice site and intron sequence,using the vectors VH-PCR1 and VK-PCR1 as templates (Riechmann et al.,1988). The DNA sequence was confirmed to be correct for the VH and VK inthe chimeric expression vectors. The DNA and amino acid sequences of theVH and VK genes in the expression cassettes are shown in FIGS. 1 and 2.

Example 3 Expression of Chimeric Antibodies 3.1 Expression in StableCell Lines

The host cell line for antibody expression was NS0, a non-immunoglobulinproducing mouse myeloma, obtained from the European Collection of AnimalCell Cultures, Porton UK (ECACC No 85110503). The heavy and light chainexpression vectors were co-transfected into NS0 cells byelectroporation. Colonies expressing the gpt gene were selected inDulbecco's Modified Eagle's Medium (DMEM) supplemented with 10% foetalbovine serum (FBS), 0.8 μg/ml mycophenolic acid and 250 μg/ml xanthine.Transfected cell clones were screened for production of human antibodyby ELISA for human IgG. Cell lines secreting antibody were expanded andthe highest producers selected and frozen down in liquid nitrogen. Thebest producing cell lines for each antibody were expanded in medium asabove but with only 5% FBS. Chimeric antibodies were purified usingProsep®-A (Bioprocessing Ltd). The concentration was determined by ELISAfor human IgGκ antibody. The antibodies were also analyzed by SDS-PAGE.

3.2 Transient Expression of Chimeric Antibodies

To expedite the testing of the different chimeric antibodies, transientexpression was used to produce quickly small quantities of cellsupernatant containing recombinant antibody for testing. The mC2 V_(H)and V_(K) expression cassettes were transferred to vectors based onpcDNA3.1 (Invitrogen) for transient expression. The heavy chain vectorincluded a human IgG constant region. The light chain vector included ahuman kappa constant region. Both mC2 V_(H) AF and mC2 V_(H) B weretransfected with mC2 V_(K) into human embryonic kidney (HEK 298) cellswith Lipofectamine 2000 reagent (Invitrogen Cat No: 11668) according tothe protocol supplied by the manufacturer. Conditioned medium washarvested from cells 3 days after transfection. The amount of antibodyproduced was determined by ELISA for human IgGκ antibody.

Example 4 Activity of Chimeric C2 Antibodies 4.1 Activity of Chimeric C2Antibodies Produced by Transient Transfection

Samples of conditioned medium from transient transfection for the twodifferent chimeric antibodies were tested in the ELISA for binding toAmyloid Beta. The results clearly indicate that the C2 VH AF is thecorrect sequence. The C2 V_(H) AF/C2 V_(K) chimeric antibody binds wellin the assay, but the C2 V_(H) B/C2 V_(K) does not show any binding atall. The Chemicon 1560 murine control antibody showed good binding, butbinding by the purified murine C2 antibody supplied was low. It shouldbe noted that a different secondary antibody was employed for the murineantibodies with the mouse constant regions compared to the chimericantibodies with human constant regions, so the results are not directlycomparable. Conditioned medium from the C2 hybridoma was later found togive a good result in the assay.

4.2 Activity of Purified Chimeric C2 Antibodies

The two different C2 chimeric antibodies were purified from stable NS0cell lines as described and tested using the Amyloid Beta ELISA. Theresults obtained are in accordance with the results obtained withtransiently expressed antibody. The C2 ChVH AF/ChVK antibody binds wellin the ELISA and the C2 ChVH B/ChVK antibody does not bind at all.

Example 5 Design of Humanized C2 Antibody Genes

The mC2 V_(H) and V_(K) amino acid sequences were compared to rodentantibody V_(H) and V_(K) sequences in the NCBI and Kabat databases.

5.1 Light Chain Variable Region

The closest match mouse germ line gene to mC2 V_(K) is bb1, LocusMMU231201, (Schable et al, 1999). Only two amino acids differ from thisgerm line sequence, both located within CDRL1. Mature murine antibodieswith similar, but not identical, sequence are found. Several have anidentical CDRL2 and identical CDRL3, but the CDRL1 of mC2 seems to beunique. mC2 V_(K) can be assigned to Kabat subgroup MuV_(K)II. Position87 of mC2 V_(K) is F rather than the Y that is more common in thesubgroup, indicating that this framework residue may be important forantibody activity. Comparison with human germ line V_(K) sequences showsthat genes from subgroup V_(K)II are the best match for mC2 V_(K) (Coxet al, 1994). Sequence DPK15 together with the human J region HuJ_(K)1were selected to provide the acceptor framework sequences for thehumanized V_(K).

Four humanized V_(K) sequences were designed. C2HuVK1 consists of mC2V_(K) CDRs with frameworks from DPK 15 and human J_(K)1. In versions 2,3 and 4 murine residues have been substituted in the framework atpositions 45 or 87 or both. Residue 45 may be involved in supporting theconformation of the CDRs. Residue 87 is located at the interface of theV_(H) and V_(K) domains. Therefore these residues may be critical formaintenance of antibody binding.

The positions and changes that have been made in the light chainframework regions are shown in Table 6. A comparison of the humanizedsequences with mC2 V_(K) sequence, and with DPK15 and human J_(K)1

5.2 Heavy Chain Variable Region

The closest match mouse germ line gene to mC2 V_(H) AF is VH7183, LocusAF120466, (Langdon et al, 2000). The comparison is shown in FIG. 3. Nineamino acids differ from this germ line sequence, most being locatedwithin CDR2. Mature murine antibodies with identical or similar (oneresidue different) CDR1 or with similar CDR2 (one residue different) arefound, but none with all three CDRs identical to mC2 V_(H) AF. CDR3 ofmC2 antibody is unusually short, consisting of only three residues.However, other antibodies are found in the database with CDR3 of thislength. mC2 V_(H) AF can be assigned to Kabat subgroup MuV_(H111)D.Residue 47 of mC2 V_(H) is L rather than the more common W, and residue94 is S rather than the normal R, indicating that these frameworkresidues may be important for antibody activity. Comparison with humangerm line V_(H) sequences shows that genes from subgroup V_(H)III arethe best match for mC2 V_(H). Sequence DP54 together with the human Jregion HuJ_(H)6 was selected to provide the acceptor framework sequencesfor the humanized V_(H).

Four humanized V_(H) sequences were designed. C2HuVH1 consists of mC2V_(H) AF CDRs with frameworks from DP54 and HuJ_(H)6. In versions 2, 3and 4 murine residues have been substituted in the framework atpositions 47 or 94 or both. Residue 47 in framework 2 makes contact bothwith the CDRs and with the V_(K) domain. Residue 94 may be involved insupporting the conformation of the CDRs. Therefore these residues may becritical for maintenance of antibody binding.

The positions and changes that have been made in the heavy chainframework regions are shown in Table 7.

Example 6 Construction of Humanized Antibody Genes

The modified variable regions were constructed by the method ofoverlapping PCR recombination. The expression cassettes for the chimericantibody, C2 ChV_(H) AF and C2 ChV_(K) were used as templates formutagenesis of the framework regions to the required sequences. Sets ofmutagenic primer pairs were synthesized encompassing the regions to bealtered. The humanized V_(H) and V_(K) expression cassettes producedwere cloned into pUC19 and the entire DNA sequence was confirmed to becorrect for each V_(H) and V_(K). The modified heavy and light chainV-region genes were excised from pUC19 as HindIII to BamHI expressioncassettes. These were transferred to the expression vectors pSVgpt andpSVhyg which include human IgG4 Ser-pro or κ constant regionsrespectively, as for the chimeric antibody vectors. The DNA sequence wasconfirmed to be correct for the humanized V_(H) and V_(K) in theexpression vectors.

Example 7 Expression of Humanized Antibodies 7.1 Expression in StableCell Lines

The humanized heavy and light chain expression vectors wereco-transfected into NS0 cells by electroporation, as for the expressionof chimeric antibodies. Antibody producing cell lines were selected andexpanded and humanized antibodies purified, exactly as for the chimericantibody. The purified antibodies were analyzed by SDS-PAGE.

7.2 Transient Expression of Humanized Antibodies

To expedite testing of the different humanized V_(H) and V_(K)constructs, the C2 humanized V_(H) and V_(K) expression cassettes werealso transferred to the vectors for transient expression described insection 7.2. The four humanized C2 V_(K) constructs were co-transfectedwith the chimeric C2 V_(H) construct into HEK293 cells. Similarly, thefour humanized C2 V_(H) constructs were co-transfected with the chimericC2 V_(K) construct into HEK293 cells. Conditioned medium was harvestedfrom cells three days after transfection. The amount of antibodyproduced was determined by ELISA for human IgGκ antibody.

Example 8 Activity of Humanized C2 Antibodies 8.1 Activity of HumanizedC2 Antibodies Produced by Transient Transfection

Samples of conditioned medium from the transient transfection weretested in the Amyloid Beta ELISA. The results obtained clearly indicatethat the humanized VH constructs C2 HuVH AF versions 2 and 4 arefunctional when combined with the chimeric C2 kappa chain, and arecomparable to the chimeric C2 antibody in the assay. In contrast, theantibodies containing C2 HuVH AF versions 1 and 3 combined with thechimeric C2 kappa chain show no binding at all in the assay. Thisindicates that the substitution of the murine residue at position 94 isessential for antibody activity. Antibodies containing the chimeric C2heavy chain combined with the four humanized C2 kappa chains all showedgood binding, comparable to the chimeric antibody, in the ELISA.

8.2 Activity of Purified Humanized C2 Antibodies

Eight different humanized C2 antibodies comprising all combinations oftwo humanized heavy chains and four humanized light chains were purifiedfrom stable NS0 cell lines as described and tested using the AmyloidBeta ELISA (FIG. 4).

The results obtained clearly indicate that C2 HuVH4 antibodies performbetter in the assay than C2 HuVH2 antibodies. Of the C2 HuVH2antibodies, C2 HuVH2/HuVK3 shows the best binding activity, but this isapproximately 2 fold reduced compared to the chimeric control antibodyC2 ChVHAF/ChVK. C2 HuVH2/HuVK2 activity is four to five fold reducedcompared to the control. The activities of the antibodies comprisingC2HuVH4 with the four different humanized light chains are similar. Thehighest activity is observed for C2HuVH4/HuVK1 and all four antibodiesare close to the control chimeric antibody in the assay.

Example 9 Modifications to CDRL2

9.1 Design Light Chain with Modified CDR 2

As noted above, many antibodies share the same CDRL2 sequence(“KVSNRFS”) as the C2 antibody. It was decided to test whether CDRL2could be modified slightly without adversely affecting antibodyactivity. Two conservative substitutions were selected: R for K atposition 50 and S for N at position 53. The two alternative CDRL2sequences are therefore “RVSNRFS” and “KVSSRFS”. These were incorporatedinto the murine V_(K) sequence with no other changes, as mC2 VK-R andmC2 VK-S respectively.

9.2 Transient Expression of Modified CDRL2 Antibody

The two C2 light chain constructs with modified CDRL2 described inSection 11.2.1 were cloned into the light chain vector for transientexpression. Each was co-transfected with the chimeric C2 V_(H) vectorinto HEK293 cells. Conditioned medium was harvested from cells threedays after transfection. The amount of antibody produced was determinedby ELISA for human IgGκ antibody.

9.3 Activity of C2 Antibody with Modified CDRL2

Samples of conditioned medium from the transient transfection of mC2V_(K)S with modified CDRL2 combined with mC2 V_(H) were tested in theAmyloid Beta ELISA. (FIG. 5) Both the VK-R and the VK-S antibodies arecomparable to the chimeric C2 antibody, indicating that the individualmodifications to CDRL2 chosen do not markedly affect the activity of theantibody in the assay.

Example 10 Affinity Determination

To assess the binding specificity and affinity of mouse (ACI-01-Ab-7-C2)chimeric (AF) and humanized antibodies (H4K1; H4K4), BIACORE® analysiswas performed using amyloid beta 1-42 monomers and fibers as antigenimmobilized on a CM5 chip. BIACORE® technology utilizes changes in therefractive index at the surface layer upon binding of the antibody tothe antigen immobilized on the layer. Binding is detected by surfaceplasmon resonance (SPR) of laser light refracting from the surface.Analysis of the signal kinetics on rate and off rate allows thediscrimination between non-specific and specific interaction. Theconcentration of antibody used was in the range of 0.05 μM to 1.0 μM.

TABLE 1 Binding specificity and affinity of mouse (ACI-01-Ab-7-C2)chimeric (AF) and humanized antibodies (H4K1; H4K4) for amyloid beta1-42 monomers and fibers Monomers Fibers k_(a)(1/Ms) k_(d)(1/s) KD (M)k_(a)(1/Ms) k_(d)(1/s) KD (M) Mouse ACI-01-Ab-7-C2 1.8E+04 2.7E−031.5E−07 2.4E+04 9.9E−04 4.1E−08 chimeric AF 4.7E+04 9.5E−04 2E−085.1E+04 3.3E−04 6.5E−09 humanized H4K1 5.0E+04 9.5E−04 1.9E−08 4.9E+042.3E−04 4.7E−09 humanized H4K4 2.5E+04 4.4E−04 1.8E−08 1.3E+05 3.0E−042.3E−09

Example 11 Immunohistochemical Binding Assay 11.1 Human Brain Sections

Brains from healthy, non-demented pre-AD and AD patients were obtainedfrom the Universitätsklinik in Bonn after ethical approval. Brains werefixed in formaldehyde and the hippocampus region was dehydrated,embedded in paraffin and 5 μm sections were cut with a microtome.Paraffin sections were stored at RT until use. For fresh material, 5 μmcryosections were cut with a cryostat and sections stored at −80° C.until use.

11.2 Immunohistochemistry

Paraffin sections were deparaffinized and rehydrated by bathing slidesin xylene followed by 100% ethanol, 90% ethanol and 70% ethanol.Background was decreased by 30 minutes incubation in 10% H₂0₂, 10%methanol in water. Antigen retrieval was obtained by incubating theslides in 100% formic acid for 3 minutes. After 3 washes in Trisbuffered saline (TBS, pH 7.5), non-specific labeling was blocked by a 2hour incubation of the slides in 10% BSA, 0.25% Triton X-100 in TBS.After washing (3 washes in TBS) blocking of endogenous antibodies wasperformed by adding a non-labeled anti-human IgG (Biomeda) andincubating slides in humid chambers overnight at RT. After another 3washes, the primary human anti amyloid antibody was added to the slidesand incubated another 24 hours at RT. Following washing, an alkalinephosphatase labeled secondary anti human IgG (Sigma) was added to theslides and incubated for 2 hours at RT. After washing, slides weredeveloped with Liquid permanent Red (Dakocytomation) washed with waterand air-dried before mounting with permanent mounting media(corbitbalsam).

Cryosection were fixed in methanol for 30 minutes at −80° C. andbackground decreased by adding H₂0₂ to the cold methanol to a finalconcentration of 10% and incubating for 30 minutes at RT. After 3 washesin Tris buffered saline (TBS, pH7.5), non-specific labeling was blockedby a 2 hour incubation of the slides in 10% BSA, 0.25% Triton X 100 inTBS as above and the same staining procedure as above was carried out.

Sections were examined with a Leica DMLB microscope and photographedusing a Leica DC500 camera and Leica FireCam1.2.0 software.

Both human antibodies A and C labeled plaques of brains from AD diseasepatients (FIG. 6). Both diffuse and cored plaques were labeled.Moreover, diffuse plaques in non -demented pre-AD patients could also bedetected by the A and C antibodies. Amyloid in cerebral amyloidangiopathy (CAA) was labeled with both antibodies and some staining ofneurons which may correspond to intracellular amyloid was also detected.No labeling was seen on control brains from healthy patient. Plaquescould be detected on paraffin sections pretreated with formic acid butno plaques were labeled on paraffin sections without formic acidpretreatment and on cryosections fixed in methanol. The human antibody Bdid not detect plaques on paraffin sections and the mouse antibody didnot stain either paraffin or cryosections of human brains.

Abbreviations:

A=binding chimeric antibody AF (IgG4) (mC2ChVHAF)B=non-binding chimeric antibody B (IgG4) (mC2VHB)C=binding humanized antibody H4K1 (IgG4) (HuVH4/HuVK1)Mouse=ACI-01-Ab-C2 mouse antibody (IgG2b)

Example 12 Functionality of mC2 on Amyloid Fibers

12.1 Modification of Conformation of Aâ1-42 Fibers and Initiation ofDisaggregation after Binding of the mC2 Antibody

In order to evaluate the mechanism by which the antibody is capable todisaggregate preformed beta-amyloid (Aβ₁₋₄₂) fibers a head-to-headcomparison of Thioflavin-T (Th-T) fluorescent assay was performedmeasuring disaggregation and solid-state Nuclear Magnetic Resonance(NMR) of U-¹³C Tyrosine10 and Valine12-labeled Aβ1-42 peptide analysingsecondary conformation (FIG. 7A). The mC2 antibody solubilised 35.4% ofthe preformed Aβ1-42 fibers and simultaneously induced a shift insecondary conformation from beta sheet to random coiled. The reductionin the population of the beta sheet conformation with respect to therandom coil is of the order of 35% and is therefore in close agreementwith that measured using fluorescence Th-T assay (FIG. 7B). These dataindicate that the binding of the mC2 antibody initiates a transition ofthe secondary structure which potentially causes a destabilization ofthe parallel intermolecular arrangement of the beta sheets affecting abreak of elongated fibers into smaller fragments.

12.2 Conformation-Dependent Binding Affinity of mC2 Antibody

Since it is well known in the scientific literature that a proportion ofthe antibody-antigen binding energy can be used for energy-dependentmodification of the conformation of an antigen (Blond and Goldberg,1987), a comparison experiment of the binding affinity of the C2antibody to the whole Aβ₁₋₄₂ protein and to a smaller, nine amino acidlong, peptide comprising the antibody's epitope was performed (FIG. 8).For this comparison the affinities of the humanized antibody C2 wereanalyzed by ELISA using biotinylated peptides covering the completeamino-acid sequence of the C2's epitope (produced by Mimotopes andpurchased from ANAWA Trading SA) and a biotinylated complete Aβ1-42peptide (Bachem). The analysis was done according to the manufacturer's(Mimotopes) instructions. As demonstrated in FIG. 8 and Table 2, theantibody binds with a 36.0% higher affinity to the peptide comprisingits specific epitope (aminoacids 13-21 of the Aβ₁₋₄₂ sequence) than tothe whole Aβ1-42 protein. It is therefore suggested that the differencein binding affinity energy was used for the energy-consuming transitionof the secondary conformation of the amyloid protein to present theantigen in a more acceptable position for the antibody interaction. Thisexplains why the affinity of the antibody is lower for the native (thewhole amyloid protein) than for the isolated subunit.

TABLE 2 O.D Amyloid beta 13-21 Amyloid beta 1-42 hC2 1.225 0.9005Control IgG 0.171 0.196

Example 13 Effects of the Anti-Amyloid hC2 on the Aggregation of AmyloidBeta 1-42 Peptide

To evaluate the ability of the humanized anti-human amyloid betamonoclonal antibody hC2 to mediate anti-aggregating and disaggregatingeffects on amyloid beta (Aβ) a thioflavin T spectrofluorescence assaywas accomplished.

13.1 Inhibition of Aggregation Assay

Aβ1-42 lyophilized powder was reconstituted in hexafluoroisopropanol(HFIP) to 1 mM. The peptide solution was sonicated for 15 min at roomtemperature, agitated overnight, and aliquots made into non-siliconizedmicrocentrifuge tubes. The HFIP was then evaporated under a stream ofargon. The resulting peptide film was vacuum dried for 10 min and storedat −80° C. until used.

To assay for the antibody-mediated inhibition of Aβ1-42 aggregation thehC2 antibody was pre-diluted in PBS and an assay solution containing thefollowing components was made in a non-siliconized incubation tube: 3.3or 0.33 μM pre-diluted antibody, 10 μM thioflavin T, 33 μM Aβ1-42, and8.2% DMSO. Therefore the final molar ratios of antibody to Aβ1-42 were1:10 and 1:100. Appropriate control solutions were also prepared. Thesolutions were then incubated for 24 hrs at 37° C., and thespectrofluorescence (relative fluorescence units; RFU) read in sixreplicates in black 384-well plates (Perkin-Elmer) on a Perkin-ElmerFluoroCount spectrofluorometer. The spectrofluorescence was thenmeasured and % disaggregation calculated as described below.

13.2 Disaggregation Assay

To assay for antibody-mediated disaggregation of pre-aggregated Aβ1-42,a low-molecular weight Aβ1-42, prepared as described above, was made upas a 110 μM solution in 27% DMSO and 1×PBS. This solution was thenallowed to aggregate at 37° C. for 24 hrs after which the following wereadded: 3.3 or 0.33 μM pre-diluted antibody, and 110 μM thioflavin T.This resulted in a molar ratio of 1:10 and 1:100 antibody to Aβ1-42.This solution was then incubated for additional 24 hrs at 37° C. Thespectrofluorescence was then measured and % disaggregation calculated asdescribed below.

13.3 Calculation

Inhibition of aggregation or disaggregation is expressed as mean %inhibition or disaggregation, respectively, ±standard error of the mean(SEM) according to the following equation:

${\% \mspace{14mu} {inhibition}} = {\frac{\begin{matrix}{\left( {{{RFU}\mspace{14mu} {of}\mspace{14mu} {pos}\mspace{14mu} {contrl}} - {{RFU}\mspace{14mu} {of}\mspace{14mu} {neg}\mspace{14mu} {contrl}}} \right) -} \\\begin{pmatrix}{{{RFU}\mspace{14mu} {of}\mspace{14mu} {sample}\mspace{14mu} {with}\mspace{14mu} A\; {\beta 1}\text{-}42} -} \\{{RFU}\mspace{14mu} {of}\mspace{14mu} {sample}\mspace{14mu} {without}\mspace{14mu} A\; {\beta 1}\text{-}42}\end{pmatrix}\end{matrix}}{\left( {{{RFU}\mspace{14mu} {of}\mspace{14mu} {pos}\mspace{14mu} {contrl}} - {{RFU}\mspace{14mu} {of}\mspace{14mu} {neg}\mspace{14mu} {contrl}}} \right)} \times 100\%}$

13.4 Result 13.4.1 Inhibition of Aβ1-42 Aggregation

Inhibition of Aβ1-42 aggregation using the hC2 antibody is shown inTable 3 and FIG. 11. At an antibody to Aβ1-42 molar ratio of 1:100 theinhibition averaged 30% (2 independent experiments), whereas at a 1:10molar ratio the inhibition was 80% (2 independent experiments; see Table3).

TABLE 3 hC2-mediated inhibition of Aβ1-42 aggregation at a 1:100 and1:10 antibody to Aβ1-42 molar ratios. Molar ratio (antibody to Aβ1-42)Antibody 1:100 1:10 hC2 30.0 ± 4.1% 80.4 ± 6.9%

13.9.2 Disaggregation of Pre-Aggregated Aβ1-42

Disaggregation of pre-aggregated Aβ1-42 using the hC2 antibody is shownin Table 4 and FIG. 12. At an antibody to Aβ1-42 molar ratio of 1:100the disaggregation averaged 24%, whereas at a 1:10 molar ratio thedisaggregation was 32% (3 independent experiments; see Table 4).

TABLE 4 hC2-mediated disaggregation of pre-aggregated Ab1-42 at a 1:100and 1:10 antibody to Aβ1-42 molar ratios. Molar ratio (antibody toAβ1-42) Antibody 1:100 1:10 hC2 23.9 ± 4.4% 31.9 ± 3.5%

Using the thioflavin T assay, the bi-functional properties of theanti-Aβ humanized antibody hC2 can be demonstrated, namely to inhibitthe aggregation of Aβ1-42 into pathogenic protofibrillar conformationand in addition to disaggregate preformed Aβ1-42 protofibrils. hC2inhibited Aβ1-42 aggregation by 80% at an antibody to Aβ1-42 molar ratioof 1:10. The ability of hC2 to disaggregate pre-aggregated protofibrilsof Aβ1-42 at a 1:10 molar ratio was shown to be 32%.

Example 14 Conformation-Specific Binding of mC2 to Different Classes ofAmyloid Protein

In order to evaluate the specificity of mC2 to different stages ofpolymerized amyloid protein, monomeric, polymeric soluble and fibrillicamyloid, an ELISA coated with these different stages of polymericbeta-amyloid was performed (FIG. 9). Monomers were prepared according toa modified method published by (Klein, 2002), soluble polymeric amyloidbeta according to (Barghorn et al., 2005), whereas fibers were performedby incubation of amyloid (Bachem, Switzerland) with a finalconcentration of 1 μg/μl in Tris/HCl pH 7.4 at 37° C. for 5 daysfollowed by a centrifugation step (10,000 rpm for 5 minutes). Thenamyloid polymers were coated on an ELISA plates with a finalconcentration of 55 μg/ml and binding affinity ELISA by using ananti-mouse IgG monoclonal antibody (Jackson) labelled with alkalinephosphate was performed. As demonstrated in Table 5 the mC2 antibodybinds with higher affinity to soluble polymeric amyloid beta than tofibers and with the lowest to monomers. These data indicate that theantibody's binding is influenced by the amyloid epitope and by theconformation of the different amyloid aggregates.

TABLE 5 Conformation-specific binding of mC2 to Amyloid Monomers,Oligomers and Fibres mC2 Ab Conc O.D (ug/ml) Oligomer Fibers Monomers0.625 2.806 1.620 1.155 0.312 1.724 0.989 0.649 0.156 1.036 0.631 0.3970.078 0.652 0.499 0.333

Example 15 Epitope Mapping of AC Immune's Monoclonal Antibody hC2

Epitope mapping of the humanized monoclonal antibody hC2 was performedby ELISA using three different peptide libraries. One library compriseda total of 33 biotinylated peptides covering the complete amino acid(aa) sequence of Aβ1-42 (produced by Mimotopes and purchased from ANAWATrading SA), the second library contains biotinylated peptides usingpeptide 12 (aa12-20 of Aβ) from the first peptide library andsubstituting each aa in the sequence by an alanine (see table 8 below),and the third library contains biotinylated peptides 13, 14, or 15 (aa13-21, 14-22 or 15-23 of Aβ) and substituting in each case the lastamino acids to an alanine or to a glycine for aa 21 which is already analanine (see table 9 below). A biotinylated complete Aβ1-42 peptide wasused as positive control (Bachem). Epitope mapping was done according tothe manufacturer's (Mimotopes) instructions. Briefly, Streptavidincoated plates (NUNC) were blocked with 0.1% BSA in PBS overnight at 4°C. After washing with PBS-0.05% Tween 20, plates were coated for 1 hourat RT with the different peptides from the library, diluted in 0.1% BSA,0.1% Sodium Azide in PBS to a final concentration of 10 μM. Afterwashing, plates were incubated for 1 hour at RT with the hC2 antibody ora non A

binding chimeric IgG4 antibody diluted to 200 ng/ml in 2% BSA, 0.1%Sodium Azide in PBS. Plates were washed again and incubated withalkaline phosphatase conjugated goat anti human IgG for 1 h at RT. Afterfinal washing, plates were incubated with phosphatase substrate (pNPP)and read at 405 nm using an ELISA plate reader.

It was shown that the humanized monoclonal antibody hC2 boundspecifically to peptides 12,13,14,15 and 16 of the first peptidelibrary. These peptides comprise aa 12-20, 13-21, 14-22, 15-23 and 16-24respectively of Aβ1-42, suggesting that the epitope lies in region 12-24of Aβ. A second library with alanine substitutions was used to determinethe critical aa for binding to Aβ12-20 (VHHQKLVFF). The binding of thehC2 antibody is lost completely when amino acids 16, 17, 19 or 20 aresubstituted by an alanine, indicating that these aa are absolutelycritical for binding of the antibody to Aβ. The binding of the hC2antibody is partially lost when aa 15 and 18 are substituted.

The binding was also almost completely lost when aa 14 was substitutedfor an alanine, indicating that aa 14 is also very important forbinding.

Finally, a third library was used to determine whether aa 21, 22 or 23are critical for binding to the epitope. The binding of the antibody toaa 15-23 was reduced when aa 23 was substituted for an alanine,indicating that aa 23 is also important for binding. The binding waspartially lost when aa 21 was substituted for a glycine and slightlylost when aa 22 was substituted for an alanine.

Example 16 Neuroprotection by the hC2 Antibody

The ability of antibody hC2 to protect neurons from Abetaoligomer-induced degeneration was assessed in an in vitro assay.Embryonic day 16.5-17.5 mouse cortical neurons were isolated,dissociated, and cultured in vitro in N3-F12 media. The cells were grownfor nine days in total, and were fed on day 3 and on the day that Abetaoligomer, or Abeta oligomer plus anti-Abeta antibody hC2 was added. Atday five (“4 days Abeta”) or day six (“3 days Abeta”), certain wells ofcells were treated with either 2 μM Abeta oligomer alone, or acombination of 2 μM Abeta oligomer and 50 μg/mL anti-Abeta antibody hC2.

The Abeta oligomer was prepared by dissolving Abeta 1-42 (rPeptide) inHFIP, from which Abeta peptides were aliquoted into 10 μl aliquots at 1mg/ml and then evaporated in a fume hood for 30 minutes and peptidefilms were stored at −80 C until use. Upon use, the peptide film wasdissolved in 10 μl of DMSO, then 78.6 μl of HAMS F12, and the Abetapeptide solution was incubated at 4 C for 24-48 hours (25 μM finalconcentration of Abeta).

For control cells, DMSO-F12 alone was added at the same volume asAbeta-DMSO at day 5, and the cells were cultured for an additional 4days without any additional treatment. On day 9, neurons from allculture conditions were fixed and stained with Tuj1 (ananti-beta-tubulin antibody), followed by staining with secondaryantibodies labeled with FITC to visualize microtubules, and thusneuronal processes in general. The results are shown in FIG. 13.

Untreated mouse embryonic cortical neurons showed normal morphologyafter nine days of culture (FIG. 13, leftmost panel). Treatment of thecells with Abeta oligomer for three days induced axon degeneration andcaused a decrease in the total number of axons (FIG. 13, lower centerpanel), and this effect was even more pronounced at four days oftreatment (FIG. 13, upper center panel). In contrast, the cells treatedwith the combination of Abeta oligomer and anti-Abeta antibody hC2looked similar to control cells (FIG. 13, upper and lower right panels).These results indicate that anti-Abeta antibody hC2 was able to protectembryonic mouse cortical neurons from Abeta oligomer-induceddegeneration.

TABLE 6 Positions and changes made in the humanized C2 light chainframework regions Position Light chain 45 87 50 53 Mouse C2V_(K) K F K NHumanized C2HuV_(K)1 Q Y K N Humanized C2HuV_(K)2 Q F K N HumanizedC2HuV_(K)3 K Y K N Humanized C2HuV_(K)4 K F K N Human Germline dpk15 Q YL N Mouse C2V_(K)-R R Mouse C2V_(K)-S S

TABLE 7 Positions and changes made in the humanized C2 heavy chainframework regions Position Heavy chain 47 94 Mouse C2VHAF L S HumanizedC2HuVHAF1 W R Humanized C2HuVHAF2 W S Humanized C2HuVHAF3 L R HumanizedC2HuVHAF4 L S Human Germline DP-54 W R

A total of 8 different antibodies were constructed with light chainsHumanized C2HuV_(K)1, C2HuV_(K)2, C2HuV_(K)3, C2HuV_(K)4 and heavychains C2HuVHAF4 and C2HuVHAF2

TABLE 8 Summary of peptides used in the second library p12-20 V H H Q KL V F F A12 A H H Q K L V F F A13 V A H Q K L V F F A14 V H A Q K L V FF A15 V H H A K L V F F A16 V H H Q A L V F F A17 V H H Q K A V F F A18V H H Q K L A F F A19 V H H Q K L V A F A20 V H H Q K L V F A aa no. 1213

15

18

aa that are important for binding are marked in italics and underscoreand aa absolutely critical for binding are marked in italics and bold.

TABLE 9 Summary of peptides used in the third library. p13-21 H H Q K LV F F A p13-21 G21 H H Q K L V F F G p14-22 H Q K L V F F A E p14-22 A22H Q K L V F F A A p15-23 Q K L V F F A E D p15-23 A23 Q K L V F F A E Aaa no. 13

15

18

21 22 23 aa that are important for binding are marked in italics andunderscore and aa absolutely critical for binding are marked in italicsand bold

Example 17 Binding of AC Immune's Monoclonal Antibody mACI-01-Ab7 C2 toAmyloid Species in Western Blot and Dot Blot

To determine whether the binding of the mouse antibody mACI-01-Ab7 C2 isdependent on the native conformation of A

a comparison of the binding to linearized amyloid by Western Blot ornative amyloid on Dot Blot was performed (FIGS. 2 a and 2 b)

Amyloid monomers were generated by dissolving Aβ1-42 peptide in HFIP andthe solvent evaporated under argon. Dried peptide film was stored at−80° C. until use. For preparation of monomers, the peptide film wasresuspended in DMSO to a concentration of 2.75 μg/μl and diluted in PBSto 1 μg/μl. For preparation of oligomers, dried peptide film wasresuspended in DMSO to 5 mM, sonicated and PBS added to reach 400 uMamyloid followed by the addition of SDS to a final concentration of0.2%. After 6 hour incubation at 37° C., the amyloid was diluted inwater to a final concentration of 100 μM and incubated another 18 h at37° C. The amyloid oligomers were precipitated with ice-cold 33%methanol, 4% acetic acid solution for 1 h at 4° C., spun down at 16200 gfor 10 minutes and the pellet resuspended in 5 mM Na2H2PO4, 35 mM NaClpH 7.4 to a final concentration of 1 μg/μl. For preparation of fibers,peptide film was diluted in Tris-HCl 50 mM buffer to get a concentrationof 1 mg/ml of amyloid and incubated at 37° C. for 5 days. The tubes werespun at 10000g for 5 minutes and the pellet resuspended in 0.1Mcarbonate buffer pH 9.6 to reach 1 μg/μl.

1 or 5 μg of monomers, oligomers or fibers were diluted in PBS and inloading buffer and applied to a 12% SDS-PAGE and the gel transferred tonitrocellulose membranes. Alternatively, 3 or 1μg or 100 and 10 ng ofamyloid species were diluted in PBS and were dotted directly onto thenitrocellulose membrane and the membranes dried at RT for 1 hour. Afterblocking for 30 minutes with Casein solution (Vector), the membraneswere incubated for 30 minutes with mACI-01-Ab7 C2 or 6E10 (Chemicon)antibodies diluted to 1 μg/ml in Casein solution. After 3 washes inCasein solution, the membranes were incubated at RT for 30 minutes withHRP-labeled goat anti-mouse IgG (Dako Cytomation) diluted in Caseinsolution, washed 3 times and developed with DAB substrate (DakoCytomation).

The monoclonal mouse antibody mACI-01-Ab7 C2 bound specifically tomonomers, oligomers and fibers in the Dot Blot assay as did the positivecontrol antibody 6E10. In contrast, the mACI-01-Ab7C2 antibody did notdetect linearized amyloid species by Western Blot in contrast to the6E10 antibody which clearly recognized all linearized peptides. Thisresult demonstrates that the binding of mACI-0′-Ab7 C2 to amyloid isdependent on the native conformation of amyloid.

Example 18 mACI-01Ab7 C2-Aβ₁₋₄₂ Interactions

The interactions between AC immune's lead antibody mACI-01-Ab7 C2 (mC2)with amyloid peptide Aβ₁₋₄₂ was studies using surface plasmon resonance.The binding of the mouse antibody mACI-01-Ab7 C2 to either monomers orfibers of Aβ₁₋₄₂ were determined.

All SPR experiments were carried out on a Biacore X instrument (BiacoreAB). Reagents for immobilization (EDC, NHS and ethanolamine), sensorchips CM5 and SA as well as running and sample buffer HBS-EP werepurchased from Biacore AB. Sodium acetate (10 mM, pH 5.0) was used ascoupling buffer to increase coupling yield. Fibrillar Aβ₁₋₄₂ (BAchem)was prepared by adding PBS buffer to Aβ₁₋₄₂ to a final concentration of3 mg/ml and leaving the vials at 37° C. for 7 days. Fibrillar Aβ₁₋₄₂ wascoupled to a CM5 sensor chip containing a surface-bound carboxymethyldextran matrix. Biotinylated monomeric Aβ₁₋₄₂ (Bachem) was coupled to aSensor chip SA consisting of carboxymethyl dextran matrix withcovalently attached Streptavidin. Typically four or five concentrationsof mAb were assayed by serial dilutions using running buffer. Injectionswere performed starting from the lowest concentration and were passedover both fc 1 and 2 at a flow rate of 30 μL'min for 3 min. Flow cell 2was underivatised and responses were subtracted from fc 1 to correct forinstrument noise and bulk refractive changes. After injection wasfinished, the surfaces were washed immediately with running buffer for 5min. To remove remaining bound antibody from the Aβ₁₋₄₂ fibrils, surfaceregeneration was performed by injecting pulses of 10 mM NaOH. Kineticanalysis was performed using algorithms for numerical integration andglobal analysis using BIAevaluation 3.0. The curves obtained forinjections of analyte at different concentrations were overlaid and thebaselines adjusted to zero. For curve fitting, all data were fitsimultaneously to a 1:1 homogeneous complex.

Binding of the mouse mACI-01-Ab7 C2 antibody to amyloid was determinedto be relatively strong. As demonstrated in Table 2, the mouse antibodymACI-01-Ab7 C2 bound specifically to immobilized Aβ₁₋₄₂ fibers with anaverage association constant (ka) of 3.8×10⁻⁴ M/s, a dissociationconstant (kd) of 1.1×10⁻³ s⁻¹ and therefore with the resulting averageKD of 3.5×10⁻⁸ M. Association of the mACI-01-Ab7 C2 to Aβ monomers wassimilar or slightly faster with an average ka of 1.6×10⁻⁴ M/s but thedissociation was more rapid giving a KD of 2.5×10⁻⁷ M.

TABLE 2 Monomers Fibers k_(a)(1/Ms) k_(d)(1/s) KD (M) k_(a)(1/Ms)k_(d)(1/s) KD (M) mACI-01-Ab7 C2 1.8E+04 2.7E−03 1.5E−07 2.4E+04 9.9E−044.1E−08 exp. 1 mACI-01-Ab7 C2 1.5E+04 5.3E−03 3.5E−07 5.60E+04 9.66E−041.73E−08 exp. 2 mACI-01-Ab7 C2 3.26E+04 1.49E−03 4.58E−08 exp. 3 averagemACI-01- 1.6E+04 4.0E−03 2.5E−07 3.8E+04 1.1E−03 3.5E−08 Ab7 C2 ±0.211.84 1.41 1.66 0.3 1.53

Example 19 Binding of mACI-01-Ab7 C2 Monoclonal Antibody to AmyloidFibers

To analyze the molecular binding side of the antibody on pre-formedfibers negatively contrasted transmission electronic microscopy (TEM)was performed (FIGS. 3 a and 3 b).

The antibody, mACI-01-Ab7 C2, was coupled with 8 nm colloidal goldaccording to^(4,5). For the co-incubation of amyloid 1-42 (Aβ1-42)fibers 6.65 uM fibers were incubated for 24 h at RT with thegold-labeled antibody with the molar ratio of 1:100. Subsequently 5 μlof sample were incubated on the fresh glow-discharged Cu grid (mesh 200)covered with parlodium/C film for 45 seconds, washed 3 times with waterand 1 times with 2% fresh diluted and filtered uranyl acetate. Sampleswere stained in 2% uranyl acetate for 15-20 sec. Excess of stain on thegrids was sucked and consequently air-dried. Three grids of each samplewere prepared. The grids were analyzed in transmission electronmicroscopy Hitachi 7000.

The monoclonal antibody, mACI-01-Ab7 C2, binds directly to Aβ₁₋₄₂fibers. Interestingly the antibody exhibits no symmetric binding to axisof single fibers but binds to particular and not all areas of sidebranches of the fiber network. It seemed to be the antibody targetsspecific regions within the side branches. The potential explanation isa specific secondary structure which occurs only in this specific sidebranches. This hypothesis is supported by NMR data demonstrating thatthe antibody induced transition on conformation and therefore it islikely that its binding is dependent on a conformation of the amyloidfiber comprising a β-sheet structure.

Example 20 Epitope Mapping of Monoclonal Antibody mACI-01-Ab7 C2

Epitope mapping of the monoclonal antibody mACI-01-Ab7 C2 was performedby ELISA using three different peptide libraries. One library comprisesa total of 33 biotinylated peptides covering the complete amino acid(aa) sequence of Aβ1-42 (produced by Mimotopes and purchased from ANAWATrading SA), the second library contains biotinylated peptides usingpeptide 12 (aa12-20 of Aβ) from the first peptide library andsubstituting each amino acid in the sequence by an alanine (see table 41below), and the third library contains biotinylated peptides 13, 14, or15 (aa 13-21, 14-22 or 15-23 of Aβ) and substituting in each case thelast amino acids to an alanine or to a glycine for aa 21 which isalready an alanine (see table 5 below). A biotinylated complete Aβ1-42peptide was used as positive control (Bachem). Epitope mapping was doneaccording to the manufacturer's (Mimotopes) instructions. Briefly,Streptavidin coated plates (NUNC) were blocked with 0.1% BSA in PBSovernight at 4° C. After washing with PBS-0.05% Tween 20, plates werecoated for 1 hour at RT with the different peptides from the library,diluted in 0.1% BSA, 0.1% Sodium Azide in PBS to a final concentrationof 10 μM. After washing, plates were incubated for 1 hour at RT with themACI-01-Ab7 C2 antibody or an isotype control mouse IgG2b antibody,diluted to 10 μg/ml in 2% BSA, 0.1% Sodium Azide in PBS. Plates werewashed again and incubated with alkaline phosphatase conjugated goatanti mouse IgG for 1 h at RT. After final washing, plates were incubatedwith phosphatase substrate (pNPP) and read at 405 nm using an ELISAplate reader.

It was shown that the monoclonal antibody mACI-01-Ab7 C2 boundspecifically to peptides 12, 13, 14 and 15 of the first peptide library.These 4 peptides comprise as 12-20 (VHHQKLVFF), 13-21 (HHQKLVFFA), 14-22(HQKLVFFAE) and 15-23 (QKLVFFAED) of Aβ1-42 suggesting that the epitopelies in region 12-23 of Aβ. A second library with alanine substitutionswas used to determine the critical as for binding to peptide 12-20(VHHQKLVFF). The binding of the mACI-01-Ab7 C2 antibody is lostcompletely when as 16, 17, 19 or 20 are substituted by an alanine,indicating that these as are absolutely critical for binding of theantibody to Aβ. The binding of the mACI-01-Ab7 C2 antibody is partiallylost when aa 15 and 18 are substituted.

The binding was also almost completely lost when aa 14 was substitutedfor an alanine, indicating that aa 14 is also very important forbinding.

Finally, a third library was used to determine whether aa 21, 22 or 23are critical for binding to the epitope. The binding of the antibody toaa 15-23 was reduced when aa 23 was substituted for an alanine,indicating that aa 23 is also important for binding. The binding waspartially lost when aa 21 was substituted for a glycine and slightlylost when aa 22 was substituted for an alanine.

TABLE 4 Summary of peptides used in the second library. p12-20 V H H Q KL V F F A12 A H H Q K L V F F A13 V A H Q K L V F F A14 V H A Q K L V FF A15 V H H A K L V F F A16 V H H Q A L V F F A17 V H H Q K A V F F A18V H H Q K L A F F A19 V H H Q K L V A F A20 V H H Q K L V F A aa no. 1213

15

18

aa that are important for binding are marked in italics and underscoredand aa absolutely critical for binding are marked in italics and boldand underscored

TABLE 5 Summary of peptides used in the third library. p13-21 H H Q K LV F F A p13-21 G21 H H Q K L V F F G p14-22 H Q K L V F F A E p14-22 A22H Q K L V F F A A p15-23 Q K L V F F A E D p15-23 A23 Q K L V F F A E Aaa no. 13

15

18

21 22 23 aa that are important for binding are marked in italics andunderscored and aa absolutely critical for binding are marked in italicsand bold and underscored

Example 21 Influence of Passive Vaccination with mACI-01-Ab7 C2 on BrainAmyloid Load in Single Transgenic hAPP Mice

To assess the in vivo capacity of the mACI-01-Ab7 C2 monoclonal antibodyto bind and clear soluble amyloid out of the brain, 6 month old singlehAPP mice⁹, gender and age matched, were used for a passive immunizationstudy with different dose. Soluble Amyloid load was analyzed at the endof the study by harvesting the brain of the animals and by performing anAβ1-40 and Aβ1-42 specific ELISA (TGC, Germany).

8-13 animals per group received two injections at an interval of oneweek of 100, 300 and 1000 μg monoclonal antibody in 200 μl PBS whereasinjection of PBS alone served as control. One day after the secondinjection animals were sacrificed for biochemical analysis of solubleamyloid fraction. To quantify the amount of human Aβ1-40 and humanAβ1-42 in the soluble fraction of the brain homogenates and/or incerebrospinal fluid (CSF), commercially availableEnzyme-Linked-Immunosorbent-Assay (ELISA) kits were used (h Amyloid β40or β42 ELISA high sensitive, TGC, Switzerland). The ELISA was performedaccording to the manufacturer's protocol. Briefly, standards (a dilutionof synthetic Aβ1-40 or Aβ1-42) and samples were prepared in a 96-wellpolypropylene plate without protein binding capacity (Greiner, Germany).The standard dilutions with final concentrations of 1000, 500, 250, 125,62.5, 31.3 and 15.6 pg/ml and the samples were prepared in the samplediluent, furnished with the ELISA kit, to a final volume of 60 μl. Sinceamyloid levels increase with the age of the mouse and since the actualevaluation requires that the readings of the samples are within thelinear part of the standard curve, the samples for Aβ 40 analysis werediluted 2:3, the samples for Aja 42 analysis were not diluted.

Samples, standards and blanks (50 μl) were added to the anti-Aβ-coatedpolystyrol plate (capture antibody selectively recognizes the C-terminalend of the antigen) in addition with a selective anti-Aβ-antibodyconjugate (biotinylated detection antibody) and incubated overnight at4° C. in order to allow formation of theantibody-Amyloid-antibody-complex. The following day, aStreptavidine-Peroxidase-Conjugate was added, followed 30 minutes laterby the addition of a TMB/peroxide mixture, resulting in the conversionof the substrate into a colored product and the color intensity wasmeasured by means of photometry with an ELISA-reader with a 450 nmfilter. Quantification of the Aβ content of the samples was obtained bycomparing absorbance to the standard curve made with synthetic Aβ1-40 orAβ1-42. Data were expressed as individual changes to mean control value(in percent to control).

The total amount of Aβ40 in brain homogenates could be significantlyreduced and roughly non-significantly for Aβ42 when single hAPP micewere passively immunized by two i.p. injections of monoclonal antibodyACI-01-Ab7 C2 at a dose of 300 μg (Aβ40: −27.3±13.9% with p<0.05; Aβ42:−8.6±22.4 with p=0.56; unpaired Student's T test), whereas 100 and 1,000μg didn't reach significance. Immunization with 100 μg lead to anincrease for Aβ40 and Aβ42 in brain homogenates (Aβ40: 32.3±36.8%; Aβ42:38.3±51.4%) whereas treatment with 1,000 μg elicited the right tendencyof amyloid burden lowering and could be potentially effective with anincreased number of animals per group (Aβ40: −2.2±26.0%; Aβ42:−9.3±15.9%). These data demonstrate that in an acute immunizationprotocol the antibody mACI-01-Ab7 C2 is capable to decrease the totalamount of soluble Aβ in the brain of this murine AD model.Interestingly, it seems to be that the dose-relationship is transientbut more studies with larger groups must be performed in order to gainsignificant data.

Example 22 Influence of Chronic Passive Administration of mACI-01-Ab7 C2on Plaque Load in Double Transgenic hAPPxPS1 Mice

To assess the in vivo capacity of the mACI-01-Ab7 C2 monoclonal antibodyto bind and reduce amyloid plaques in the brain, 3.5 month old doubletransgenic hAPPxPS1 mice¹⁰, gender and age matched, were used for a 4month long chronic passive immunization study. Amyloid plaques wereanalyzed at the end of the study by histochemistry of the brain of theanimals by binding of Thioflavin S.

15 transgenic animals received 16 weekly injections of 500 μg monoclonalantibody in PBS. 15 animals were injected with PBS alone, serving ascontrols. All injections were given intra-peritoneally. At sacrifice,mice were anaesthetized and flushed trans-cardially with physiologicalserum at 4° C. to remove blood from the brain vessels. Subsequently, thebrain was removed from the cranium and hindbrain and forebrain wereseparated with a cut in the coronal/frontal plane. The forebrain wasdivided evenly into left and right hemisphere by using a midlinesagittal cut. One hemisphere was post-fixed overnight in 4%paraformaldehyde for histology. Sagittal vibratome sections (40 μm) werecut for free floating incubations and stored at 4° C. until staining inPBS with 0.1% sodium azide. Five sections at different levels werestained for dense plaques with Thioflavin S. Sections of all animalsused were randomized for staining and blind quantification. Images wereacquired with a Leica DMR microscope equipped with a Sony DXC-9100Pcamera and analyzed with a computer using Leica Q-Win software. Lightintensity and condenser settings for the microscope were kept constantthroughout the image acquisition process. All acquired images weresubjected to the same computer subroutines to minimize investigatorbias. Density slice thresholding was applied uniformly throughoutanalysis. The area of the subiculum was selected for automaticquantification of the amyloid load in the Thioflavin S staining.

The total plaque load and the number of plaques in the area of subiculumcould be significantly reduced when double hAPP/PS1 mice were passivelyimmunized for 4 months as described above. In plaque load a significantdecrease of 31% (mACI-01-Ab7 C2: 1.11±0.21% and control: 1.61±0.35%;p=0.003, Mann-Whitney U-Test) could be achieved whereas the chronicpassive immunization significantly reduced the amount of plaques by 19%(mACI-01-Ab7 C2: 8.73±1.36 and control: 10.78±1.36; p=0.006,Mann-Whitney U-Test), indicating that plaque solubilization occurred toa slightly lesser degree than plaque disruption.

Example 23 Influence of Passive Vaccination with mACI-01-Ab7 C2 onMemory Capacity in Single Transgenic hAPP Mice

To analyze the in vivo capacity of the mACI-01-Ab7 C2 antibody to modifyor increase cognitive functionality, 9 month old single hAPP mice,gender and age matched, were used for passive immunization study.Non-spatial cognition was measured at the end of the immunization periodassessed by new Object Recognition Task (ORT).

12 animals per group received two intra peritoneal injections of 400 μgmonoclonal antibody in 200 μl PBS whereas injection of PBS alone servedas control. One day after the second injection cognitive capability werestudied in a new Object Recognition Task (ORT)^(12, 13). For ORTenrollment mice were placed for 10 minutes into a behavioral arena andfaced to a new unknown object. Exploration time was recorded. Threehours later the same animals were re-placed into the same arena for a2^(nd) session but faced with the old, previously explored, andadditionally with a new object. Again, exploration times for bothobjects were recorded and resulting cognition index was calculated asthe ratio of exploration time for the new object related to totalexploration time and expressed as proportional changes to the control.

Passive vaccination with mACI-0′-Ab7 C2 leads to a significant increaseof cognitive memory capacities in single transgenic AD mice (mACI-01-Ab7C2: 131.6±9.1% and control: 100.0±9.2% with p<0.05; unpaired Student's Ttest and n=12 per each group).

REFERENCE LIST

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1-170. (canceled)
 171. A pharmaceutical composition comprising achimeric antibody or a fragment thereof, or a humanized antibody or afragment thereof, which antibody recognizes and binds to at least onedistinct binding site on the β-amyloid protein wherein said distinctbinding site comprises at least one or at least two consecutive aminoacid residues predominantly involved in the binding of the antibody,selected from the group consisting of: (i) -Lys-Leu- within SEQ ID NO:10; (ii) -Phe-Phe- within SEQ ID NO: 9; (iii) His within the followingsequence: -His-Xaa₂-Lys-Leu-Xaa₄-Phe-Phe-Xaa₅-Xaa₆-Asp.-

wherein Xaa₂ is an amino acid residue selected from the group comprisingAsn and Gln; Xaa₄ is an amino acid residue selected from the groupcomprising Ala, Val, Leu, norleucine, Met, Phe, and Ile: Xaa₅ is anamino acid residue selected from the group comprising Ala, Val, Leu, Serand Ile; Xaa₆ is an amino acid residue selected from the groupcomprising Glu and Asp; and (iv) Asp within the following sequence:-His-Xaa₂-Lys-Leu-Xaa₄-Phe-Phe-Xaa₅-Xaa₆-Asp.-

wherein Xaa₂ is an amino acid residue selected from the group comprisingAsn and Gln; Xaa₄ is an amino acid residue selected from the groupcomprising Ala, Val, Leu, norleucine, Met, Phe, and Ile: Xaa₅ is anamino acid residue selected from the group comprising Ala, Val, Leu, Serand Ile; Xaa₆ is an amino acid residue selected from the groupcomprising Glu and Asp.
 172. A pharmaceutical composition comprising ahumanized antibody or a fragment thereof comprising variable regionswith human- or primate-derived framework regions and CDRs with an aminoacid sequence of SEQ ID NO: 1 representing CDR1, SEQ ID NO: 2representing CDR2 and SEQ ID NO: 3 representing CDR3 of the Heavy ChainVariable Region (HCVR) and SEQ ID NO: 4 representing CDR1, SEQ ID NO: 5representing CDR2 and SEQ ID NO: 6 representing CDR3 of the Light ChainVariable Region (LCVR).
 173. The pharmaceutical composition of claim172, wherein the chimeric antibody or fragment thereof, or humanizedantibody or fragment thereof comprises the humanized light chain of SEQID NO: 13, and the humanized heavy chain of SEQ ID NO:
 16. 174. Thepharmaceutical composition of claim 171 in combination with physicalmethods, lipid-based methods, and receptor and channel-based methods fortransporting the antibodies across the blood-brain barrier, for use inthe treatment or alleviation of the effects of amyloidosis, a group ofdiseases and disorders associated with amyloid plaque formationincluding secondary amyloidosis and age-related amyloidosis such asdiseases including, but not limited to, neurological disorders such asAlzheimer's Disease (AD and diseases or conditions characterized by aloss of cognitive memory capacity such as, for example, mild cognitiveimpairment (MCI). Lewy body dementia, Down's syndrome, hereditarycerebral hemorrhage with amyloidosis (Dutch type); the GuamParkinson-Dementia complex; as well as other diseases which are based onor associated with amyloid-like proteins such as progressivesupranuclear palsy, multiple sclerosis; Creutzfeld Jacob disease,Parkinson's disease, HIV-related dementia, ALS (amyotropic lateralsclerosis), inclusion-body myositis (IBM), Adult Onset Diabetes; senilecardiac amyloidosis; endocrine tumors, and others, including maculardegeneration.
 175. A method for monitoring minimal residual disease in apatient following treatment with a pharmaceutical composition accordingto claim 171, 172, or 173, wherein said method comprises: a. bringing asample suspected to contain the amyloid antigen into contact with anantibody as described in claim 171, 172, or 173, which antibody binds anepitope of the amyloid protein; b. allowing the antibody to bind to theamyloid antigen to form an immunological complex; c. detecting theformation of the immunological complex; and d. correlating the presenceor absence of the immunological complex with the presence or absence ofamyloid antigen in the sample, e. comparing the amount of saidimmunological complex to a normal control value, wherein an increase inthe amount of said aggregate compared to a normal control valueindicates that said patient still suffers from a minimal residualdisease.
 176. A method for predicting responsiveness of a patient beingtreated with a pharmaceutical composition according to claim 171, 172,or 173, comprising a. bringing a sample suspected to contain the amyloidantigen into contact with an antibody as described in claim 171, 172, or173, which antibody binds an epitope of the amyloid protein; b. allowingthe antibody to bind to the amyloid antigen to form an immunologicalcomplex; c. detecting the formation of the immunological complex; and d.correlating the presence or absence of the immunological complex withthe presence or absence of amyloid antigen in the sample, e. comparingthe amount of said immunological complex before and after onset of thetreatment, wherein a decrease in the amount of said aggregate indicatesthat said patient has a high potential of being responsive to thetreatment.
 177. A method for reducing the plaque load in the brain of ananimal, particularly a mammal, but especially a human suffering from adisease or condition leading to an increased plaque load in the braincomprising administering to an animal, particularly a mammal, moreparticularly a human in need of such a treatment, a therapeuticallyeffective amount of the pharmaceutical composition of claim 171, 172,173, or
 174. 178. A method for reducing the amount of plaques in thebrain of an animal, particularly a mammal, but especially a humansuffering from a disease or condition leading to an increased plaqueload in the brain comprising administering to an animal, particularlymammal, more particularly a human in need of such a treatment, atherapeutically effective amount of the pharmaceutical composition ofclaim 171, 172, 173, or
 174. 179. A method for decreasing the totalamount of soluble Aβ in the brain of an animal, particularly a mammal,but especially a human suffering from a disease or condition leading toincreased concentrations of soluble Aβ in the brain comprisingadministering to an animal, particularly a mammal, more particularly ahuman in need of such a treatment, a therapeutically effective amount ofthe pharmaceutical composition of claim 171, 172, 173, or
 174. 180. Amethod for retaining or increasing cognitive memory capacity in a mammalexhibiting an amyloid-associated disease or condition comprisingadministering to an animal, particularly a mammal, more particularly ahuman in need of such a treatment, a therapeutically effective amount ofthe pharmaceutical composition of claim 171, 172, 173, or 174.